Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 RKM1YPL208W 1752 nt1.62□□□□□ -2.15
VPS3P23643 SEC63YOR254C 1992 nt1.61□□□□□ -2.15
VPS3P23643 SEY1YOR165W 2331 nt1.61□□□□□ -2.15
VPS3P23643 BRO1YPL084W 2535 nt1.61□□□□□ -2.15
VPS3P23643 RPH1YER169W 2391 nt1.61□□□□□ -2.15
VPS3P23643 ATP17YDR377W 306 nt1.61□□□□□ -2.15
VPS3P23643 RPL29YFR032C-A 180 nt1.61□□□□□ -2.15
VPS3P23643 RAD6YGL058W 519 nt1.61□□□□□ -2.15
VPS3P23643 YGL109WYGL109W 324 nt1.61□□□□□ -2.15
VPS3P23643 BMT5YIL096C 1011 nt1.61□□□□□ -2.15
VPS3P23643 TRX1YLR043C 312 nt1.61□□□□□ -2.15
VPS3P23643 YLR307C-AYLR307C-A 264 nt1.61□□□□□ -2.15
VPS3P23643 IPP1YBR011C 864 nt1.61□□□□□ -2.15
VPS3P23643 YPR170CYPR170C 336 nt1.61□□□□□ -2.15
VPS3P23643 POL5YEL055C 3069 nt1.6□□□□□ -2.15
VPS3P23643 CRM1YGR218W 3255 nt1.6□□□□□ -2.15
VPS3P23643 YDL009CYDL009C 324 nt1.6□□□□□ -2.15
VPS3P23643 RPI1YIL119C 1224 nt1.6□□□□□ -2.15
VPS3P23643 PEP8YJL053W 1140 nt1.6□□□□□ -2.15
VPS3P23643 YJL119CYJL119C 324 nt1.6□□□□□ -2.15
VPS3P23643 YNL226WYNL226W 411 nt1.6□□□□□ -2.15
VPS3P23643 YBR287WYBR287W 1284 nt1.6□□□□□ -2.15
VPS3P23643 SSK2YNR031C 4740 nt1.6□□□□□ -2.15
VPS3P23643 STB4YMR019W 2850 nt1.6□□□□□ -2.15
VPS3P23643 MON2YNL297C 4911 nt1.59□□□□□ -2.15
VPS3P23643 PFD1YJL179W 330 nt1.59□□□□□ -2.15
VPS3P23643 GRX8YLR364W 330 nt1.59□□□□□ -2.15
VPS3P23643 YLR366WYLR366W 306 nt1.59□□□□□ -2.15
VPS3P23643 YOR364WYOR364W 369 nt1.59□□□□□ -2.15
VPS3P23643 YBR174CYBR174C 315 nt1.59□□□□□ -2.15
VPS3P23643 VMR1YHL035C 4779 nt1.58□□□□□ -2.16
VPS3P23643 YBP1YBR216C 2025 nt1.58□□□□□ -2.16
VPS3P23643 YNL150WYNL150W 408 nt1.58□□□□□ -2.16
VPS3P23643 YOR105WYOR105W 327 nt1.58□□□□□ -2.16
VPS3P23643 YOR394C-AYOR394C-A 168 nt1.58□□□□□ -2.16
VPS3P23643 TPM2YIL138C 486 nt1.57□□□□□ -2.16
VPS3P23643 YJL047C-AYJL047C-A 135 nt1.57□□□□□ -2.16
VPS3P23643 YLR031WYLR031W 561 nt1.57□□□□□ -2.16
VPS3P23643 ATP15YPL271W 189 nt1.57□□□□□ -2.16
VPS3P23643 SXM1YDR395W 2835 nt1.57□□□□□ -2.16
VPS3P23643 CCH1YGR217W 6120 nt1.56□□□□□ -2.16
VPS3P23643 YGL069CYGL069C 465 nt1.56□□□□□ -2.16
VPS3P23643 LAG1YHL003C 1236 nt1.56□□□□□ -2.16
VPS3P23643 AIM18YHR198C 966 nt1.56□□□□□ -2.16
VPS3P23643 DFG10YIL049W 762 nt1.56□□□□□ -2.16
VPS3P23643 PLC1YPL268W 2610 nt1.56□□□□□ -2.16
VPS3P23643 MSH3YCR092C 3057 nt1.55□□□□□ -2.16
VPS3P23643 YDR042CYDR042C 603 nt1.55□□□□□ -2.16
VPS3P23643 BUD19YJL188C 309 nt1.55□□□□□ -2.16
VPS3P23643 RPC25YKL144C 639 nt1.55□□□□□ -2.16
VPS3P23643 CYB5YNL111C 363 nt1.55□□□□□ -2.16
VPS3P23643 GRX5YPL059W 453 nt1.55□□□□□ -2.16
VPS3P23643 SPC29YPL124W 762 nt1.55□□□□□ -2.16
VPS3P23643 YCL002CYCL002C 792 nt1.55□□□□□ -2.16
VPS3P23643 SPE1YKL184W 1401 nt1.55□□□□□ -2.16
VPS3P23643 GNT1YOR320C 1476 nt1.55□□□□□ -2.16
VPS3P23643 MDM20YOL076W 2391 nt1.55□□□□□ -2.16
VPS3P23643 YER038W-AYER038W-A 381 nt1.54□□□□□ -2.16
VPS3P23643 SEC28YIL076W 891 nt1.54□□□□□ -2.16
VPS3P23643 HSK3YKL138C-A 210 nt1.54□□□□□ -2.16
VPS3P23643 SDS22YKL193C 1017 nt1.54□□□□□ -2.16
VPS3P23643 ARV1YLR242C 966 nt1.54□□□□□ -2.16
VPS3P23643 SKI3YPR189W 4299 nt1.53□□□□□ -2.16
VPS3P23643 MZM1YDR493W 372 nt1.53□□□□□ -2.16
VPS3P23643 DPB11YJL090C 2295 nt1.53□□□□□ -2.16
VPS3P23643 YMR304C-AYMR304C-A 351 nt1.53□□□□□ -2.16
VPS3P23643 HIR3YJR140C 4947 nt1.53□□□□□ -2.16
VPS3P23643 YLR419WYLR419W 4308 nt1.52□□□□□ -2.17
VPS3P23643 APM3YBR288C 1452 nt1.52□□□□□ -2.17
VPS3P23643 snR5snR5 204 nt1.52□□□□□ -2.17
VPS3P23643 MND1YGL183C 660 nt1.52□□□□□ -2.17
VPS3P23643 BET4YJL031C 984 nt1.52□□□□□ -2.17
VPS3P23643 PHO80YOL001W 882 nt1.52□□□□□ -2.17
VPS3P23643 YBR063CYBR063C 1215 nt1.52□□□□□ -2.17
VPS3P23643 ROX1YPR065W 1107 nt1.52□□□□□ -2.17
VPS3P23643 HKR1YDR420W 5409 nt1.52□□□□□ -2.17
VPS3P23643 RRI2YOL117W 1938 nt1.52□□□□□ -2.17
VPS3P23643 YDR194W-AYDR194W-A 153 nt1.51□□□□□ -2.17
VPS3P23643 VOA1YGR106C 798 nt1.51□□□□□ -2.17
VPS3P23643 YIL030W-AYIL030W-A 339 nt1.51□□□□□ -2.17
VPS3P23643 YLR140WYLR140W 327 nt1.51□□□□□ -2.17
VPS3P23643 RPS7BYNL096C 573 nt1.51□□□□□ -2.17
VPS3P23643 MSH6YDR097C 3729 nt1.51□□□□□ -2.17
VPS3P23643 YFL002W-BYFL002W-B 1317 nt1.5□□□□□ -2.17
VPS3P23643 YGR161W-AYGR161W-A 1317 nt1.5□□□□□ -2.17
VPS3P23643 YBL100W-AYBL100W-A 1317 nt1.5□□□□□ -2.17
VPS3P23643 YCL020WYCL020W 1317 nt1.5□□□□□ -2.17
VPS3P23643 URA10YMR271C 684 nt1.5□□□□□ -2.17
VPS3P23643 YNL010WYNL010W 726 nt1.5□□□□□ -2.17
VPS3P23643 RTC6YPL183W-A 282 nt1.5□□□□□ -2.17
VPS3P23643 CDC27YBL084C 2277 nt1.5□□□□□ -2.17
VPS3P23643 Q0255Q0255 1419 nt1.49□□□□□ -2.17
VPS3P23643 HMI1YOL095C 2121 nt1.49□□□□□ -2.17
VPS3P23643 snR78snR78 87 nt1.49□□□□□ -2.17
VPS3P23643 RNR4YGR180C 1038 nt1.49□□□□□ -2.17
VPS3P23643 YHR214W-AYHR214W-A 486 nt1.49□□□□□ -2.17
VPS3P23643 TIM8YJR135W-A 264 nt1.49□□□□□ -2.17
VPS3P23643 YAR068WYAR068W 486 nt1.49□□□□□ -2.17
VPS3P23643 SNC2YOR327C 348 nt1.49□□□□□ -2.17
VPS3P23643 ASM4YDL088C 1587 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 55.5 ms