Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 AC231657.2-201ENST00000624556 255 ntBASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00474Q9P2X8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 AL049796.1-201ENST00000565336 1766 ntBASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 AC007322.4-201ENST00000509611 723 ntBASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 AL591742.1-201ENST00000604433 565 ntBASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00474Q9P2X8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 RBM17P2-201ENST00000616397 1405 ntBASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 PGM5P4-201ENST00000421970 445 ntBASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 AC116050.2-201ENST00000612102 1779 ntBASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00474Q9P2X8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 AC011767.1-201ENST00000617410 1153 ntBASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 AC008694.1-202ENST00000636953 945 ntBASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms