Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 AC007322.1-201ENST00000426983 750 ntBASIC19.68■□□□□ 0.74
KRT78Q8N1N4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 MIR2861-201ENST00000636310 90 ntBASIC19.68■□□□□ 0.74
KRT78Q8N1N4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT78Q8N1N4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.67■□□□□ 0.74
KRT78Q8N1N4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 PGM5P4-201ENST00000421970 445 ntBASIC19.67■□□□□ 0.74
KRT78Q8N1N4 CNN2P6-201ENST00000439038 900 ntBASIC19.67■□□□□ 0.74
KRT78Q8N1N4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT78Q8N1N4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.66■□□□□ 0.74
KRT78Q8N1N4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 AC068338.2-201ENST00000563278 1430 ntBASIC19.66■□□□□ 0.74
KRT78Q8N1N4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.66■□□□□ 0.74
KRT78Q8N1N4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 AC069236.1-201ENST00000604339 616 ntBASIC19.65■□□□□ 0.74
KRT78Q8N1N4 AC092437.1-201ENST00000624794 1048 ntBASIC19.65■□□□□ 0.74
KRT78Q8N1N4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT78Q8N1N4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
KRT78Q8N1N4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
KRT78Q8N1N4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
KRT78Q8N1N4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT78Q8N1N4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms