Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 CWC22YGR278W 1734 nt3.54□□□□□ -1.84
PUF3Q07807 YOR329W-AYOR329W-A 210 nt3.54□□□□□ -1.84
PUF3Q07807 PHO2YDL106C 1680 nt3.54□□□□□ -1.84
PUF3Q07807 AUS1YOR011W 4185 nt3.54□□□□□ -1.84
PUF3Q07807 MNT3YIL014W 1893 nt3.54□□□□□ -1.84
PUF3Q07807 SSY1YDR160W 2559 nt3.54□□□□□ -1.84
PUF3Q07807 CCM1YGR150C 2595 nt3.54□□□□□ -1.84 RIP-Chip
PUF3Q07807 ATP25YMR098C 1839 nt3.54□□□□□ -1.84 RIP-Chip
PUF3Q07807 STU2YLR045C 2667 nt3.53□□□□□ -1.84
PUF3Q07807 RPL22AYLR061W 366 nt3.53□□□□□ -1.84
PUF3Q07807 RPL23AYBL087C 414 nt3.53□□□□□ -1.84
PUF3Q07807 HHF1YBR009C 312 nt3.53□□□□□ -1.84
PUF3Q07807 RPN2YIL075C 2838 nt3.53□□□□□ -1.84
PUF3Q07807 MPS1YDL028C 2295 nt3.53□□□□□ -1.85
PUF3Q07807 YLR352WYLR352W 2424 nt3.52□□□□□ -1.85
PUF3Q07807 YDR464C-AYDR464C-A 189 nt3.52□□□□□ -1.85
PUF3Q07807 YHL041WYHL041W 450 nt3.52□□□□□ -1.85
PUF3Q07807 YKL156C-AYKL156C-A 117 nt3.52□□□□□ -1.85
PUF3Q07807 CCW14YLR390W-A 717 nt3.52□□□□□ -1.85
PUF3Q07807 MSS11YMR164C 2277 nt3.52□□□□□ -1.85 RIP-Chip
PUF3Q07807 FLO5YHR211W 3228 nt3.52□□□□□ -1.85
PUF3Q07807 CUL3YGR003W 2235 nt3.52□□□□□ -1.85
PUF3Q07807 PKH1YDR490C 2301 nt3.52□□□□□ -1.85
PUF3Q07807 PSF1YDR013W 627 nt3.51□□□□□ -1.85
PUF3Q07807 SPT4YGR063C 309 nt3.51□□□□□ -1.85
PUF3Q07807 TIM13YGR181W 318 nt3.51□□□□□ -1.85
PUF3Q07807 YLR416CYLR416C 399 nt3.51□□□□□ -1.85
PUF3Q07807 YMR321CYMR321C 318 nt3.51□□□□□ -1.85
PUF3Q07807 YPR063CYPR063C 423 nt3.51□□□□□ -1.85
PUF3Q07807 YBR224WYBR224W 516 nt3.51□□□□□ -1.85
PUF3Q07807 LRG1YDL240W 3054 nt3.51□□□□□ -1.85
PUF3Q07807 YGR237CYGR237C 2358 nt3.5□□□□□ -1.85
PUF3Q07807 SMT3YDR510W 306 nt3.5□□□□□ -1.85
PUF3Q07807 HPA3YEL066W 540 nt3.5□□□□□ -1.85
PUF3Q07807 NCE101YJL205C 162 nt3.5□□□□□ -1.85
PUF3Q07807 PCC1YKR095W-A 267 nt3.5□□□□□ -1.85
PUF3Q07807 RPL36AYMR194W 303 nt3.5□□□□□ -1.85
PUF3Q07807 AI5_ALPHAQ0070 1893 nt3.5□□□□□ -1.85
PUF3Q07807 SQS1YNL224C 2304 nt3.49□□□□□ -1.85
PUF3Q07807 PDC2YDR081C 2778 nt3.49□□□□□ -1.85
PUF3Q07807 YDL041WYDL041W 354 nt3.49□□□□□ -1.85
PUF3Q07807 FMP32YFL046W 624 nt3.49□□□□□ -1.85
PUF3Q07807 SUP56tL(CAA)A 82 nt3.49□□□□□ -1.85
PUF3Q07807 SUP53tL(CAA)C 82 nt3.49□□□□□ -1.85
PUF3Q07807 tL(CAA)DtL(CAA)D 82 nt3.49□□□□□ -1.85
PUF3Q07807 tL(CAA)G1tL(CAA)G1 82 nt3.49□□□□□ -1.85
PUF3Q07807 SUP54tL(CAA)G2 82 nt3.49□□□□□ -1.85
PUF3Q07807 tL(CAA)G3tL(CAA)G3 82 nt3.49□□□□□ -1.85
PUF3Q07807 tL(CAA)KtL(CAA)K 82 nt3.49□□□□□ -1.85
PUF3Q07807 tL(CAA)LtL(CAA)L 82 nt3.49□□□□□ -1.85
PUF3Q07807 tL(CAA)MtL(CAA)M 82 nt3.49□□□□□ -1.85
PUF3Q07807 tL(CAA)NtL(CAA)N 82 nt3.49□□□□□ -1.85
PUF3Q07807 RPS18BYML026C 441 nt3.49□□□□□ -1.85
PUF3Q07807 YNL028WYNL028W 318 nt3.49□□□□□ -1.85
PUF3Q07807 GIS2YNL255C 462 nt3.49□□□□□ -1.85
PUF3Q07807 HHT1YBR010W 411 nt3.49□□□□□ -1.85
PUF3Q07807 TRZ1YKR079C 2517 nt3.48□□□□□ -1.85 RIP-Chip
PUF3Q07807 FAA2YER015W 2235 nt3.48□□□□□ -1.85
PUF3Q07807 SRL3YKR091W 741 nt3.48□□□□□ -1.85
PUF3Q07807 RRT15YLR162W-A 189 nt3.48□□□□□ -1.85
PUF3Q07807 BIT61YJL058C 1632 nt3.48□□□□□ -1.85
PUF3Q07807 RPA135YPR010C 3612 nt3.47□□□□□ -1.85
PUF3Q07807 SET1YHR119W 3243 nt3.47□□□□□ -1.85 RIP-Chip
PUF3Q07807 SOD1YJR104C 465 nt3.47□□□□□ -1.85
PUF3Q07807 YLR120W-AYLR120W-A 102 nt3.47□□□□□ -1.85
PUF3Q07807 YOR381W-AYOR381W-A 168 nt3.47□□□□□ -1.85
PUF3Q07807 SAR1YPL218W 573 nt3.47□□□□□ -1.85
PUF3Q07807 REC8YPR007C 2043 nt3.47□□□□□ -1.85
PUF3Q07807 AKR1YDR264C 2295 nt3.47□□□□□ -1.85
PUF3Q07807 SEC15YGL233W 2733 nt3.47□□□□□ -1.85
PUF3Q07807 MSR1YHR091C 1932 nt3.46□□□□□ -1.85 RIP-Chip
PUF3Q07807 NUP82YJL061W 2142 nt3.46□□□□□ -1.86
PUF3Q07807 RED1YLR263W 2484 nt3.46□□□□□ -1.86
PUF3Q07807 RAD5YLR032W 3510 nt3.46□□□□□ -1.86
PUF3Q07807 FLO9YAL063C 3969 nt3.46□□□□□ -1.86 RIP-Chip
PUF3Q07807 YGR250CYGR250C 2346 nt3.46□□□□□ -1.86
PUF3Q07807 YGL217CYGL217C 342 nt3.46□□□□□ -1.86
PUF3Q07807 YMR122W-AYMR122W-A 255 nt3.46□□□□□ -1.86
PUF3Q07807 TRM7YBR061C 933 nt3.46□□□□□ -1.86
PUF3Q07807 CDC24YAL041W 2565 nt3.46□□□□□ -1.86
PUF3Q07807 XRN1YGL173C 4587 nt3.46□□□□□ -1.86
PUF3Q07807 VPS64YDR200C 1815 nt3.45□□□□□ -1.86
PUF3Q07807 RPS21AYKR057W 264 nt3.45□□□□□ -1.86
PUF3Q07807 GOT1YMR292W 417 nt3.45□□□□□ -1.86
PUF3Q07807 YOR015WYOR015W 360 nt3.45□□□□□ -1.86
PUF3Q07807 YPR053CYPR053C 456 nt3.45□□□□□ -1.86
PUF3Q07807 MIT1YEL007W 2001 nt3.44□□□□□ -1.86
PUF3Q07807 YDL176WYDL176W 2127 nt3.44□□□□□ -1.86
PUF3Q07807 RRP5YMR229C 5190 nt3.44□□□□□ -1.86
PUF3Q07807 YEL025CYEL025C 3567 nt3.44□□□□□ -1.86
PUF3Q07807 snR79snR79 84 nt3.44□□□□□ -1.86
PUF3Q07807 YGL239CYGL239C 315 nt3.44□□□□□ -1.86
PUF3Q07807 CSE2YNR010W 450 nt3.44□□□□□ -1.86
PUF3Q07807 snR46snR46 197 nt3.44□□□□□ -1.86
PUF3Q07807 snR52snR52 92 nt3.44□□□□□ -1.86
PUF3Q07807 GYP7YDL234C 2241 nt3.44□□□□□ -1.86
PUF3Q07807 YIL166CYIL166C 1629 nt3.44□□□□□ -1.86 RIP-Chip
PUF3Q07807 YTA7YGR270W 4140 nt3.43□□□□□ -1.86
PUF3Q07807 PRP22YER013W 3438 nt3.43□□□□□ -1.86
PUF3Q07807 YPK1YKL126W 2043 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms