Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 RAV1YJR033C 4074 nt2.27□□□□□ -2.05
RPT4P53549 HNT1YDL125C 477 nt2.27□□□□□ -2.05
RPT4P53549 YDR220CYDR220C 294 nt2.27□□□□□ -2.05
RPT4P53549 IRC4YDR540C 540 nt2.27□□□□□ -2.05
RPT4P53549 PEP8YJL053W 1140 nt2.27□□□□□ -2.05
RPT4P53549 STE18YJR086W 333 nt2.27□□□□□ -2.05
RPT4P53549 YJR141WYJR141W 1044 nt2.27□□□□□ -2.05
RPT4P53549 RAM2YKL019W 951 nt2.27□□□□□ -2.05
RPT4P53549 TOA1YOR194C 861 nt2.27□□□□□ -2.05
RPT4P53549 TRS20YBR254C 528 nt2.27□□□□□ -2.05
RPT4P53549 IRC8YJL051W 2469 nt2.27□□□□□ -2.05
RPT4P53549 PEP1YBL017C 4740 nt2.27□□□□□ -2.05
RPT4P53549 YJR098CYJR098C 1971 nt2.27□□□□□ -2.05
RPT4P53549 DPB11YJL090C 2295 nt2.26□□□□□ -2.05
RPT4P53549 YJL016WYJL016W 1686 nt2.26□□□□□ -2.05
RPT4P53549 YOL098CYOL098C 3114 nt2.26□□□□□ -2.05
RPT4P53549 LAG1YHL003C 1236 nt2.26□□□□□ -2.05
RPT4P53549 APQ13YJL075C 417 nt2.26□□□□□ -2.05
RPT4P53549 PAU8YAL068C 363 nt2.26□□□□□ -2.05
RPT4P53549 PAU20YOL161C 363 nt2.26□□□□□ -2.05
RPT4P53549 MGR1YCL044C 1254 nt2.26□□□□□ -2.05
RPT4P53549 SPR3YGR059W 1539 nt2.26□□□□□ -2.05
RPT4P53549 UBR1YGR184C 5853 nt2.25□□□□□ -2.05
RPT4P53549 PRK1YIL095W 2433 nt2.25□□□□□ -2.05
RPT4P53549 TIM9YEL020W-A 264 nt2.25□□□□□ -2.05
RPT4P53549 TIM10YHR005C-A 282 nt2.25□□□□□ -2.05
RPT4P53549 TPM2YIL138C 486 nt2.25□□□□□ -2.05
RPT4P53549 SHE2YKL130C 741 nt2.25□□□□□ -2.05
RPT4P53549 RPL37AYLR185W 267 nt2.25□□□□□ -2.05
RPT4P53549 LOA1YPR139C 903 nt2.25□□□□□ -2.05
RPT4P53549 UBP11YKR098C 2154 nt2.25□□□□□ -2.05
RPT4P53549 YPK1YKL126W 2043 nt2.24□□□□□ -2.05
RPT4P53549 HSH155YMR288W 2916 nt2.24□□□□□ -2.05
RPT4P53549 FMP16YDR070C 282 nt2.24□□□□□ -2.05
RPT4P53549 MET32YDR253C 576 nt2.24□□□□□ -2.05
RPT4P53549 YGL024WYGL024W 336 nt2.24□□□□□ -2.05
RPT4P53549 SPC1YJR010C-A 285 nt2.24□□□□□ -2.05
RPT4P53549 YMR272W-BYMR272W-B 108 nt2.24□□□□□ -2.05
RPT4P53549 FYV12YOR183W 390 nt2.24□□□□□ -2.05
RPT4P53549 JID1YPR061C 906 nt2.24□□□□□ -2.05
RPT4P53549 TAE2YPL009C 3117 nt2.24□□□□□ -2.05
RPT4P53549 SPP41YDR464W 4308 nt2.24□□□□□ -2.05
RPT4P53549 PTC5YOR090C 1719 nt2.23□□□□□ -2.05
RPT4P53549 BRO1YPL084W 2535 nt2.23□□□□□ -2.05
RPT4P53549 YFH1YDL120W 525 nt2.23□□□□□ -2.05
RPT4P53549 GIC1YHR061C 945 nt2.23□□□□□ -2.05
RPT4P53549 UTP30YKR060W 825 nt2.23□□□□□ -2.05
RPT4P53549 YLR458WYLR458W 381 nt2.23□□□□□ -2.05
RPT4P53549 YOR105WYOR105W 327 nt2.23□□□□□ -2.05
RPT4P53549 MGM1YOR211C 2646 nt2.23□□□□□ -2.05
RPT4P53549 SET2YJL168C 2202 nt2.22□□□□□ -2.05
RPT4P53549 CRD1YDL142C 852 nt2.22□□□□□ -2.05
RPT4P53549 YGL014C-AYGL014C-A 162 nt2.22□□□□□ -2.05
RPT4P53549 CIC1YHR052W 1131 nt2.22□□□□□ -2.05
RPT4P53549 URA10YMR271C 684 nt2.22□□□□□ -2.05
RPT4P53549 RPS7BYNL096C 573 nt2.22□□□□□ -2.05
RPT4P53549 PHO80YOL001W 882 nt2.22□□□□□ -2.05
RPT4P53549 REV1YOR346W 2958 nt2.22□□□□□ -2.05
RPT4P53549 UTP13YLR222C 2454 nt2.22□□□□□ -2.05
RPT4P53549 PHR1YOR386W 1698 nt2.22□□□□□ -2.05
RPT4P53549 SNU56YDR240C 1479 nt2.21□□□□□ -2.06
RPT4P53549 RRP6YOR001W 2202 nt2.21□□□□□ -2.06
RPT4P53549 YFR056CYFR056C 369 nt2.21□□□□□ -2.06
RPT4P53549 RNR4YGR180C 1038 nt2.21□□□□□ -2.06
RPT4P53549 Q0144Q0144 330 nt2.21□□□□□ -2.06
RPT4P53549 RPL40AYIL148W 387 nt2.21□□□□□ -2.06
RPT4P53549 YLR154W-AYLR154W-A 186 nt2.21□□□□□ -2.06
RPT4P53549 RPS17AYML024W 411 nt2.21□□□□□ -2.06
RPT4P53549 CSI1YMR025W 888 nt2.21□□□□□ -2.06
RPT4P53549 RTR2YDR066C 591 nt2.2□□□□□ -2.06
RPT4P53549 TIM8YJR135W-A 264 nt2.2□□□□□ -2.06
RPT4P53549 YKL044WYKL044W 321 nt2.2□□□□□ -2.06
RPT4P53549 YLR379WYLR379W 375 nt2.2□□□□□ -2.06
RPT4P53549 YOR392WYOR392W 444 nt2.2□□□□□ -2.06
RPT4P53549 SVS1YPL163C 783 nt2.2□□□□□ -2.06
RPT4P53549 ATP15YPL271W 189 nt2.2□□□□□ -2.06
RPT4P53549 NCL1YBL024W 2055 nt2.2□□□□□ -2.06
RPT4P53549 MDM32YOR147W 1869 nt2.2□□□□□ -2.06
RPT4P53549 MSL5YLR116W 1431 nt2.19□□□□□ -2.06
RPT4P53549 YPR097WYPR097W 3222 nt2.19□□□□□ -2.06
RPT4P53549 YDL025W-AYDL025W-A 105 nt2.19□□□□□ -2.06
RPT4P53549 EAF6YJR082C 342 nt2.19□□□□□ -2.06
RPT4P53549 CMS1YLR003C 876 nt2.19□□□□□ -2.06
RPT4P53549 YLR031WYLR031W 561 nt2.19□□□□□ -2.06
RPT4P53549 RPB11YOL005C 363 nt2.19□□□□□ -2.06
RPT4P53549 SEC31YDL195W 3822 nt2.19□□□□□ -2.06
RPT4P53549 RTT107YHR154W 3213 nt2.19□□□□□ -2.06
RPT4P53549 TOF1YNL273W 3717 nt2.18□□□□□ -2.06
RPT4P53549 YKL165C-AYKL165C-A 234 nt2.18□□□□□ -2.06
RPT4P53549 LSM7YNL147W 348 nt2.18□□□□□ -2.06
RPT4P53549 ATX2YOR079C 942 nt2.18□□□□□ -2.06
RPT4P53549 YPL197CYPL197C 414 nt2.18□□□□□ -2.06
RPT4P53549 YJL127C-BYJL127C-B 159 nt2.17□□□□□ -2.06
RPT4P53549 VTI1YMR197C 654 nt2.17□□□□□ -2.06
RPT4P53549 PEX17YNL214W 600 nt2.17□□□□□ -2.06
RPT4P53549 IRC20YLR247C 4671 nt2.17□□□□□ -2.06
RPT4P53549 YDR194W-AYDR194W-A 153 nt2.16□□□□□ -2.06
RPT4P53549 BNA7YDR428C 786 nt2.16□□□□□ -2.06
RPT4P53549 YKR051WYKR051W 1257 nt2.16□□□□□ -2.06
RPT4P53549 YBL012CYBL012C 402 nt2.16□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms