Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 CDH1YGL003C 1701 nt2.93□□□□□ -1.94
SPC98P53540 YDR183C-AYDR183C-A 258 nt2.93□□□□□ -1.94
SPC98P53540 YHL006W-AYHL006W-A 354 nt2.93□□□□□ -1.94
SPC98P53540 tT(UGU)Q1tT(UGU)Q1 76 nt2.93□□□□□ -1.94
SPC98P53540 TIM8YJR135W-A 264 nt2.93□□□□□ -1.94
SPC98P53540 PHD1YKL043W 1101 nt2.93□□□□□ -1.94
SPC98P53540 YMR320WYMR320W 306 nt2.93□□□□□ -1.94
SPC98P53540 YOR225WYOR225W 330 nt2.93□□□□□ -1.94
SPC98P53540 snR191snR191 274 nt2.93□□□□□ -1.94
SPC98P53540 ROM1YGR070W 3468 nt2.93□□□□□ -1.94
SPC98P53540 snR70snR70 164 nt2.92□□□□□ -1.94
SPC98P53540 GCN4YEL009C 846 nt2.92□□□□□ -1.94
SPC98P53540 RPL20BYOR312C 519 nt2.92□□□□□ -1.94
SPC98P53540 GCD6YDR211W 2139 nt2.91□□□□□ -1.94
SPC98P53540 YLR031WYLR031W 561 nt2.91□□□□□ -1.94
SPC98P53540 EGD1YPL037C 474 nt2.91□□□□□ -1.94
SPC98P53540 RPL33AYPL143W 324 nt2.91□□□□□ -1.94
SPC98P53540 NAB6YML117W 3405 nt2.91□□□□□ -1.94
SPC98P53540 RAX2YLR084C 3663 nt2.9□□□□□ -1.94
SPC98P53540 PDC2YDR081C 2778 nt2.9□□□□□ -1.94
SPC98P53540 DNA2YHR164C 4569 nt2.9□□□□□ -1.95
SPC98P53540 APC11YDL008W 498 nt2.9□□□□□ -1.95
SPC98P53540 SPG3YDR504C 384 nt2.9□□□□□ -1.95
SPC98P53540 YBL073WYBL073W 312 nt2.9□□□□□ -1.95
SPC98P53540 PGA1YNL158W 597 nt2.9□□□□□ -1.95
SPC98P53540 RIX1YHR197W 2292 nt2.9□□□□□ -1.95
SPC98P53540 EXO84YBR102C 2262 nt2.9□□□□□ -1.95
SPC98P53540 DYN1YKR054C 12279 nt2.9□□□□□ -1.95
SPC98P53540 BOI1YBL085W 2943 nt2.89□□□□□ -1.95
SPC98P53540 YHR078WYHR078W 1659 nt2.89□□□□□ -1.95
SPC98P53540 YIL082W-AYIL082W-A 4497 nt2.89□□□□□ -1.95
SPC98P53540 RMT2YDR465C 1239 nt2.89□□□□□ -1.95
SPC98P53540 YBP1YBR216C 2025 nt2.88□□□□□ -1.95
SPC98P53540 YER023C-AYER023C-A 213 nt2.88□□□□□ -1.95
SPC98P53540 tW(CCA)G1tW(CCA)G1 72 nt2.88□□□□□ -1.95
SPC98P53540 tW(CCA)G2tW(CCA)G2 72 nt2.88□□□□□ -1.95
SPC98P53540 tW(CCA)JtW(CCA)J 72 nt2.88□□□□□ -1.95
SPC98P53540 tW(CCA)KtW(CCA)K 72 nt2.88□□□□□ -1.95
SPC98P53540 tW(CCA)MtW(CCA)M 72 nt2.88□□□□□ -1.95
SPC98P53540 tW(CCA)PtW(CCA)P 72 nt2.88□□□□□ -1.95
SPC98P53540 RPL9BYNL067W 576 nt2.88□□□□□ -1.95
SPC98P53540 IRC23YOR044W 474 nt2.88□□□□□ -1.95
SPC98P53540 SIP3YNL257C 3690 nt2.88□□□□□ -1.95
SPC98P53540 COX1Q0045 1605 nt2.88□□□□□ -1.95
SPC98P53540 RRM3YHR031C 2172 nt2.87□□□□□ -1.95
SPC98P53540 AI2Q0055 2565 nt2.87□□□□□ -1.95
SPC98P53540 YFL063WYFL063W 456 nt2.87□□□□□ -1.95
SPC98P53540 NCE101YJL205C 162 nt2.87□□□□□ -1.95
SPC98P53540 UBP14YBR058C 2346 nt2.87□□□□□ -1.95
SPC98P53540 NPR1YNL183C 2373 nt2.87□□□□□ -1.95
SPC98P53540 YNL034WYNL034W 1839 nt2.86□□□□□ -1.95
SPC98P53540 SLH1YGR271W 5904 nt2.86□□□□□ -1.95
SPC98P53540 TOM70YNL121C 1854 nt2.86□□□□□ -1.95
SPC98P53540 DYN2YDR424C 279 nt2.86□□□□□ -1.95
SPC98P53540 TMA22YJR014W 597 nt2.86□□□□□ -1.95
SPC98P53540 SSY1YDR160W 2559 nt2.86□□□□□ -1.95
SPC98P53540 TPS2YDR074W 2691 nt2.86□□□□□ -1.95
SPC98P53540 YPL150WYPL150W 2706 nt2.85□□□□□ -1.95
SPC98P53540 ITC1YGL133W 3795 nt2.85□□□□□ -1.95
SPC98P53540 TCB2YNL087W 3537 nt2.85□□□□□ -1.95
SPC98P53540 YCR018C-AYCR018C-A 255 nt2.85□□□□□ -1.95
SPC98P53540 YIL058WYIL058W 285 nt2.85□□□□□ -1.95
SPC98P53540 FCF2YLR051C 654 nt2.85□□□□□ -1.95
SPC98P53540 YPL152W-AYPL152W-A 99 nt2.85□□□□□ -1.95
SPC98P53540 GYP7YDL234C 2241 nt2.84□□□□□ -1.95
SPC98P53540 DUF1YOL087C 3351 nt2.84□□□□□ -1.95
SPC98P53540 COX7YMR256C 183 nt2.84□□□□□ -1.95
SPC98P53540 YPL229WYPL229W 621 nt2.84□□□□□ -1.95
SPC98P53540 RPL36BYPL249C-A 303 nt2.84□□□□□ -1.95
SPC98P53540 TAO3YIL129C 7131 nt2.84□□□□□ -1.95
SPC98P53540 COG3YER157W 2406 nt2.84□□□□□ -1.95
SPC98P53540 VPS52YDR484W 1926 nt2.83□□□□□ -1.96
SPC98P53540 Q0032Q0032 291 nt2.83□□□□□ -1.96
SPC98P53540 YKL183C-AYKL183C-A 213 nt2.83□□□□□ -1.96
SPC98P53540 YKR033CYKR033C 426 nt2.83□□□□□ -1.96
SPC98P53540 UTP30YKR060W 825 nt2.83□□□□□ -1.96
SPC98P53540 RPL26AYLR344W 384 nt2.83□□□□□ -1.96
SPC98P53540 ISF1YMR081C 1017 nt2.83□□□□□ -1.96
SPC98P53540 JLP2YMR132C 627 nt2.83□□□□□ -1.96
SPC98P53540 ATP15YPL271W 189 nt2.83□□□□□ -1.96
SPC98P53540 TSC11YER093C 4293 nt2.82□□□□□ -1.96
SPC98P53540 YJL016WYJL016W 1686 nt2.82□□□□□ -1.96
SPC98P53540 NOT5YPR072W 1683 nt2.82□□□□□ -1.96
SPC98P53540 YPK1YKL126W 2043 nt2.82□□□□□ -1.96
SPC98P53540 YDL041WYDL041W 354 nt2.82□□□□□ -1.96
SPC98P53540 YDR169C-AYDR169C-A 150 nt2.82□□□□□ -1.96
SPC98P53540 WIP1YDR374W-A 270 nt2.82□□□□□ -1.96
SPC98P53540 YMR31YFR049W 372 nt2.82□□□□□ -1.96
SPC98P53540 YHR007C-AYHR007C-A 216 nt2.82□□□□□ -1.96
SPC98P53540 NUP82YJL061W 2142 nt2.82□□□□□ -1.96
SPC98P53540 BPT1YLL015W 4680 nt2.82□□□□□ -1.96
SPC98P53540 snR43snR43 209 nt2.82□□□□□ -1.96
SPC98P53540 FUS1YCL027W 1539 nt2.82□□□□□ -1.96
SPC98P53540 NET1YJL076W 3570 nt2.81□□□□□ -1.96
SPC98P53540 ESL1YIL151C 3357 nt2.81□□□□□ -1.96
SPC98P53540 YDL011CYDL011C 324 nt2.81□□□□□ -1.96
SPC98P53540 PSY1YKL076C 384 nt2.81□□□□□ -1.96
SPC98P53540 YNL337WYNL337W 255 nt2.81□□□□□ -1.96
SPC98P53540 ESF2YNR054C 951 nt2.81□□□□□ -1.96
SPC98P53540 PCF11YDR228C 1881 nt2.81□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 35.5 ms