Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CSNK1A1P48729 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 AC004911.1-201ENST00000416316 871 ntBASIC18.15■□□□□ 0.5
CSNK1A1P48729 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.15■□□□□ 0.5
CSNK1A1P48729 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.15■□□□□ 0.5
CSNK1A1P48729 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.15■□□□□ 0.5
CSNK1A1P48729 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.15■□□□□ 0.5
CSNK1A1P48729 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.15■□□□□ 0.5
CSNK1A1P48729 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSNK1A1P48729 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.14■□□□□ 0.5
CSNK1A1P48729 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CSNK1A1P48729 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.14■□□□□ 0.5
CSNK1A1P48729 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.14■□□□□ 0.5
CSNK1A1P48729 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1A1P48729 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1A1P48729 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1A1P48729 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1A1P48729 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1A1P48729 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1A1P48729 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 AC016405.3-201ENST00000607710 860 ntBASIC18.14■□□□□ 0.49
CSNK1A1P48729 MIR2861-201ENST00000636310 90 ntBASIC18.14■□□□□ 0.49
CSNK1A1P48729 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSNK1A1P48729 AC068338.2-201ENST00000563278 1430 ntBASIC18.14■□□□□ 0.49
CSNK1A1P48729 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.14■□□□□ 0.49
CSNK1A1P48729 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 AIRN-201ENST00000601203 4374 ntBASIC18.13■□□□□ 0.49
CSNK1A1P48729 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 AC080038.1-201ENST00000611274 1154 ntBASIC18.13■□□□□ 0.49
CSNK1A1P48729 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 FEM1AP1-201ENST00000431297 1995 ntBASIC18.13■□□□□ 0.49
CSNK1A1P48729 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.13■□□□□ 0.49
CSNK1A1P48729 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSNK1A1P48729 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 AC008694.1-202ENST00000636953 945 ntBASIC18.12■□□□□ 0.49
CSNK1A1P48729 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.12■□□□□ 0.49
CSNK1A1P48729 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSNK1A1P48729 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 SLC25A24-204ENST00000569674 2357 ntBASIC18.11■□□□□ 0.49
CSNK1A1P48729 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 PGM5P4-201ENST00000421970 445 ntBASIC18.11■□□□□ 0.49
CSNK1A1P48729 CYP2T1P-201ENST00000432607 1285 ntBASIC18.11■□□□□ 0.49
CSNK1A1P48729 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSNK1A1P48729 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.11■□□□□ 0.49
CSNK1A1P48729 AC069236.1-201ENST00000604339 616 ntBASIC18.11■□□□□ 0.49
CSNK1A1P48729 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms