Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeast

Predictions only

Length 992 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS41	P38959	ISU1	YPL135W	498 nt		2.69	□□□□□ -1.98
VPS41	P38959	snR191	snR191	274 nt		2.69	□□□□□ -1.98
VPS41	P38959	NUM1	YDR150W	8247 nt		2.69	□□□□□ -1.98
VPS41	P38959	RPO41	YFL036W	4056 nt		2.68	□□□□□ -1.98
VPS41	P38959	TRM2	YKR056W	1920 nt		2.68	□□□□□ -1.98
VPS41	P38959	YIL080W	YIL080W	4722 nt		2.68	□□□□□ -1.98
VPS41	P38959	APC11	YDL008W	498 nt		2.68	□□□□□ -1.98
VPS41	P38959	YDL240C-A	YDL240C-A	138 nt		2.68	□□□□□ -1.98
VPS41	P38959	YGR025W	YGR025W	303 nt		2.68	□□□□□ -1.98
VPS41	P38959	YHR139C-A	YHR139C-A	312 nt		2.68	□□□□□ -1.98
VPS41	P38959	YOR192C-C	YOR192C-C	237 nt		2.68	□□□□□ -1.98
VPS41	P38959	SLM6	YBR266C	453 nt		2.68	□□□□□ -1.98
VPS41	P38959	SNX41	YDR425W	1878 nt		2.68	□□□□□ -1.98
VPS41	P38959	LEU3	YLR451W	2661 nt		2.68	□□□□□ -1.98
VPS41	P38959	DNL4	YOR005C	2835 nt		2.68	□□□□□ -1.98
VPS41	P38959	RSE1	YML049C	4086 nt		2.68	□□□□□ -1.98
VPS41	P38959	YPL150W	YPL150W	2706 nt		2.67	□□□□□ -1.98
VPS41	P38959	AMS1	YGL156W	3252 nt		2.67	□□□□□ -1.98
VPS41	P38959	TIM11	YDR322C-A	291 nt		2.67	□□□□□ -1.98
VPS41	P38959	ATP17	YDR377W	306 nt		2.67	□□□□□ -1.98
VPS41	P38959	TSA2	YDR453C	591 nt		2.67	□□□□□ -1.98
VPS41	P38959	YER137W-A	YER137W-A	306 nt		2.67	□□□□□ -1.98
VPS41	P38959	NOP19	YGR251W	591 nt		2.67	□□□□□ -1.98
VPS41	P38959	RPS24B	YIL069C	408 nt		2.67	□□□□□ -1.98
VPS41	P38959	YKL136W	YKL136W	399 nt		2.67	□□□□□ -1.98
VPS41	P38959	RPL40B	YKR094C	387 nt		2.67	□□□□□ -1.98
VPS41	P38959	YLR012C	YLR012C	300 nt		2.67	□□□□□ -1.98
VPS41	P38959	YML099W-A	YML099W-A	330 nt		2.67	□□□□□ -1.98
VPS41	P38959	PEP12	YOR036W	867 nt		2.67	□□□□□ -1.98
VPS41	P38959	snR13	snR13	124 nt		2.67	□□□□□ -1.98
VPS41	P38959	NSL1	YPL233W	651 nt		2.67	□□□□□ -1.98
VPS41	P38959	YPL276W	YPL276W	438 nt		2.67	□□□□□ -1.98
VPS41	P38959	GCD10	YNL062C	1437 nt		2.67	□□□□□ -1.98
VPS41	P38959	DBP10	YDL031W	2988 nt		2.67	□□□□□ -1.98
VPS41	P38959	YSW1	YBR148W	1830 nt		2.66	□□□□□ -1.98
VPS41	P38959	YJR140W-A	YJR140W-A	150 nt		2.66	□□□□□ -1.98
VPS41	P38959	APC9	YLR102C	798 nt		2.66	□□□□□ -1.98
VPS41	P38959	RPB11	YOL005C	363 nt		2.66	□□□□□ -1.98
VPS41	P38959	ERP4	YOR016C	624 nt		2.66	□□□□□ -1.98
VPS41	P38959	YOR199W	YOR199W	330 nt		2.66	□□□□□ -1.98
VPS41	P38959	YPR039W	YPR039W	336 nt		2.66	□□□□□ -1.98
VPS41	P38959	MDM32	YOR147W	1869 nt		2.66	□□□□□ -1.98
VPS41	P38959	MSL5	YLR116W	1431 nt		2.66	□□□□□ -1.98
VPS41	P38959	YDR193W	YDR193W	399 nt		2.65	□□□□□ -1.99
VPS41	P38959	RTT102	YGR275W	474 nt		2.65	□□□□□ -1.99
VPS41	P38959	RPC10	YHR143W-A	213 nt		2.65	□□□□□ -1.99
VPS41	P38959	URA10	YMR271C	684 nt		2.65	□□□□□ -1.99
VPS41	P38959	SWM2	YNR004W	441 nt		2.65	□□□□□ -1.99
VPS41	P38959	YOL159C-A	YOL159C-A	273 nt		2.65	□□□□□ -1.99
VPS41	P38959	COG3	YER157W	2406 nt		2.65	□□□□□ -1.99
VPS41	P38959	SIR3	YLR442C	2937 nt		2.65	□□□□□ -1.99
VPS41	P38959	GNT1	YOR320C	1476 nt		2.65	□□□□□ -1.99
VPS41	P38959	PDR1	YGL013C	3207 nt		2.64	□□□□□ -1.99
VPS41	P38959	YGR035C	YGR035C	351 nt		2.64	□□□□□ -1.99
VPS41	P38959	ICY1	YMR195W	384 nt		2.64	□□□□□ -1.99
VPS41	P38959	ATP3	YBR039W	936 nt		2.64	□□□□□ -1.99
VPS41	P38959	SSY1	YDR160W	2559 nt		2.64	□□□□□ -1.99
VPS41	P38959	FUS1	YCL027W	1539 nt		2.63	□□□□□ -1.99
VPS41	P38959	DIE2	YGR227W	1578 nt		2.63	□□□□□ -1.99
VPS41	P38959	GPI8	YDR331W	1236 nt		2.63	□□□□□ -1.99
VPS41	P38959	RPL27B	YDR471W	411 nt		2.63	□□□□□ -1.99
VPS41	P38959	YEL018C-A	YEL018C-A	534 nt		2.63	□□□□□ -1.99
VPS41	P38959	PEX4	YGR133W	552 nt		2.63	□□□□□ -1.99
VPS41	P38959	PET191	YJR034W	327 nt		2.63	□□□□□ -1.99
VPS41	P38959	YAL063C-A	YAL063C-A	291 nt		2.63	□□□□□ -1.99
VPS41	P38959	RPS7B	YNL096C	573 nt		2.63	□□□□□ -1.99
VPS41	P38959	CRS5	YOR031W	210 nt		2.63	□□□□□ -1.99
VPS41	P38959	YOR121C	YOR121C	306 nt		2.63	□□□□□ -1.99
VPS41	P38959	YPL038W-A	YPL038W-A	192 nt		2.63	□□□□□ -1.99
VPS41	P38959	ECM5	YMR176W	4236 nt		2.63	□□□□□ -1.99
VPS41	P38959	YNL034W	YNL034W	1839 nt		2.63	□□□□□ -1.99
VPS41	P38959	PSK2	YOL045W	3306 nt		2.63	□□□□□ -1.99
VPS41	P38959	RPS17B	YDR447C	411 nt		2.62	□□□□□ -1.99
VPS41	P38959	YER188C-A	YER188C-A	300 nt		2.62	□□□□□ -1.99
VPS41	P38959	YKL033W-A	YKL033W-A	711 nt		2.62	□□□□□ -1.99
VPS41	P38959	YML009C-A	YML009C-A	327 nt		2.62	□□□□□ -1.99
VPS41	P38959	NDD1	YOR372C	1665 nt		2.62	□□□□□ -1.99
VPS41	P38959	UBP15	YMR304W	3693 nt		2.62	□□□□□ -1.99
VPS41	P38959	STE11	YLR362W	2154 nt		2.61	□□□□□ -1.99
VPS41	P38959	YPK1	YKL126W	2043 nt		2.61	□□□□□ -1.99
VPS41	P38959	YER076W-A	YER076W-A	348 nt		2.61	□□□□□ -1.99
VPS41	P38959	PEP8	YJL053W	1140 nt		2.61	□□□□□ -1.99
VPS41	P38959	YOL098C	YOL098C	3114 nt		2.61	□□□□□ -1.99
VPS41	P38959	MKT1	YNL085W	2493 nt		2.61	□□□□□ -1.99
VPS41	P38959	VPS64	YDR200C	1815 nt		2.61	□□□□□ -1.99
VPS41	P38959	MRP10	YDL045W-A	288 nt		2.6	□□□□□ -1.99
VPS41	P38959	YDR250C	YDR250C	276 nt		2.6	□□□□□ -1.99
VPS41	P38959	TIM8	YJR135W-A	264 nt		2.6	□□□□□ -1.99
VPS41	P38959	UBC7	YMR022W	498 nt		2.6	□□□□□ -1.99
VPS41	P38959	MRPL50	YNR022C	420 nt		2.6	□□□□□ -1.99
VPS41	P38959	ESF2	YNR054C	951 nt		2.6	□□□□□ -1.99
VPS41	P38959	IRA2	YOL081W	9240 nt		2.59	□□□□□ -1.99
VPS41	P38959	YNL018C	YNL018C	1839 nt		2.59	□□□□□ -1.99
VPS41	P38959	YHL006W-A	YHL006W-A	354 nt		2.59	□□□□□ -1.99
VPS41	P38959	TPS2	YDR074W	2691 nt		2.58	□□□□□ -2
VPS41	P38959	YJR098C	YJR098C	1971 nt		2.58	□□□□□ -2
VPS41	P38959	SWR1	YDR334W	4545 nt		2.58	□□□□□ -2
VPS41	P38959	YDL068W	YDL068W	330 nt		2.58	□□□□□ -2
VPS41	P38959	YDR008C	YDR008C	351 nt		2.58	□□□□□ -2
VPS41	P38959	tT(UGU)Q1	tT(UGU)Q1	76 nt		2.58	□□□□□ -2

Retrieved 100 of 7,029 protein–RNA pairs in 41.5 ms