Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 PCF11YDR228C 1881 nt3.77□□□□□ -1.81
SSF1P38789 snR79snR79 84 nt3.77□□□□□ -1.81
SSF1P38789 SHE2YKL130C 741 nt3.77□□□□□ -1.81
SSF1P38789 YAR029WYAR029W 225 nt3.77□□□□□ -1.81
SSF1P38789 YBL073WYBL073W 312 nt3.77□□□□□ -1.81
SSF1P38789 TRM7YBR061C 933 nt3.77□□□□□ -1.81
SSF1P38789 STE5YDR103W 2754 nt3.77□□□□□ -1.81
SSF1P38789 FLO9YAL063C 3969 nt3.77□□□□□ -1.81
SSF1P38789 ROM1YGR070W 3468 nt3.76□□□□□ -1.81
SSF1P38789 STE6YKL209C 3873 nt3.76□□□□□ -1.81
SSF1P38789 REV1YOR346W 2958 nt3.76□□□□□ -1.81
SSF1P38789 TLC1TLC1 1301 nt3.76□□□□□ -1.81
SSF1P38789 snR76snR76 109 nt3.76□□□□□ -1.81
SSF1P38789 tW(UCA)QtW(UCA)Q 74 nt3.76□□□□□ -1.81
SSF1P38789 YBR197CYBR197C 654 nt3.76□□□□□ -1.81
SSF1P38789 DOA4YDR069C 2781 nt3.76□□□□□ -1.81
SSF1P38789 MDM1YML104C 3384 nt3.76□□□□□ -1.81
SSF1P38789 CDC24YAL041W 2565 nt3.75□□□□□ -1.81
SSF1P38789 VTC4YJL012C 2166 nt3.75□□□□□ -1.81
SSF1P38789 RPS21AYKR057W 264 nt3.75□□□□□ -1.81
SSF1P38789 YDR183C-AYDR183C-A 258 nt3.74□□□□□ -1.81
SSF1P38789 tF(GAA)DtF(GAA)D 73 nt3.74□□□□□ -1.81
SSF1P38789 tF(GAA)NtF(GAA)N 73 nt3.74□□□□□ -1.81
SSF1P38789 RPL30YGL030W 318 nt3.74□□□□□ -1.81
SSF1P38789 RPL40AYIL148W 387 nt3.74□□□□□ -1.81
SSF1P38789 YAR070CYAR070C 300 nt3.74□□□□□ -1.81
SSF1P38789 YNL010WYNL010W 726 nt3.74□□□□□ -1.81
SSF1P38789 YBP1YBR216C 2025 nt3.74□□□□□ -1.81
SSF1P38789 DBP10YDL031W 2988 nt3.74□□□□□ -1.81
SSF1P38789 tQ(UUG)BtQ(UUG)B 72 nt3.73□□□□□ -1.81
SSF1P38789 YLR031WYLR031W 561 nt3.73□□□□□ -1.81
SSF1P38789 FCF2YLR051C 654 nt3.73□□□□□ -1.81
SSF1P38789 YPL229WYPL229W 621 nt3.73□□□□□ -1.81
SSF1P38789 ASG1YIL130W 2895 nt3.73□□□□□ -1.81
SSF1P38789 GIS4YML006C 2325 nt3.73□□□□□ -1.81
SSF1P38789 MIT1YEL007W 2001 nt3.72□□□□□ -1.81
SSF1P38789 RGR1YLR071C 3249 nt3.72□□□□□ -1.81
SSF1P38789 RPL25YOL127W 429 nt3.72□□□□□ -1.81
SSF1P38789 PUF6YDR496C 1971 nt3.72□□□□□ -1.81
SSF1P38789 DRS2YAL026C 4068 nt3.72□□□□□ -1.81
SSF1P38789 VPS64YDR200C 1815 nt3.72□□□□□ -1.81
SSF1P38789 CIN8YEL061C 3003 nt3.71□□□□□ -1.81
SSF1P38789 YEL025CYEL025C 3567 nt3.71□□□□□ -1.82
SSF1P38789 HMRA2YCR096C 360 nt3.71□□□□□ -1.82
SSF1P38789 YDR464C-AYDR464C-A 189 nt3.71□□□□□ -1.82
SSF1P38789 MZM1YDR493W 372 nt3.71□□□□□ -1.82
SSF1P38789 YER121WYER121W 345 nt3.71□□□□□ -1.82
SSF1P38789 YGR174W-AYGR174W-A 87 nt3.71□□□□□ -1.82
SSF1P38789 YHR214C-EYHR214C-E 300 nt3.71□□□□□ -1.82
SSF1P38789 RPL26AYLR344W 384 nt3.71□□□□□ -1.82
SSF1P38789 ISF1YMR081C 1017 nt3.71□□□□□ -1.82
SSF1P38789 APC9YLR102C 798 nt3.7□□□□□ -1.82
SSF1P38789 RGM1YMR182C 636 nt3.7□□□□□ -1.82
SSF1P38789 YPR146CYPR146C 330 nt3.7□□□□□ -1.82
SSF1P38789 NAB3YPL190C 2409 nt3.7□□□□□ -1.82
SSF1P38789 GCN1YGL195W 8019 nt3.69□□□□□ -1.82
SSF1P38789 snR8snR8 190 nt3.69□□□□□ -1.82
SSF1P38789 YLR012CYLR012C 300 nt3.69□□□□□ -1.82
SSF1P38789 DNL4YOR005C 2835 nt3.69□□□□□ -1.82
SSF1P38789 RPA190YOR341W 4995 nt3.69□□□□□ -1.82
SSF1P38789 ORC1YML065W 2745 nt3.68□□□□□ -1.82
SSF1P38789 DAD4YDR320C-A 219 nt3.68□□□□□ -1.82
SSF1P38789 PSY1YKL076C 384 nt3.68□□□□□ -1.82
SSF1P38789 HSK3YKL138C-A 210 nt3.68□□□□□ -1.82
SSF1P38789 YKR033CYKR033C 426 nt3.68□□□□□ -1.82
SSF1P38789 YMR290W-AYMR290W-A 348 nt3.68□□□□□ -1.82
SSF1P38789 GIN4YDR507C 3429 nt3.67□□□□□ -1.82
SSF1P38789 ROG1YGL144C 2058 nt3.67□□□□□ -1.82
SSF1P38789 DBP7YKR024C 2229 nt3.67□□□□□ -1.82
SSF1P38789 MET6YER091C 2304 nt3.66□□□□□ -1.82
SSF1P38789 NET1YJL076W 3570 nt3.66□□□□□ -1.82
SSF1P38789 NOT5YPR072W 1683 nt3.66□□□□□ -1.82
SSF1P38789 YDR169C-AYDR169C-A 150 nt3.66□□□□□ -1.82
SSF1P38789 YGL014C-AYGL014C-A 162 nt3.66□□□□□ -1.82
SSF1P38789 OST1YJL002C 1431 nt3.66□□□□□ -1.82
SSF1P38789 KSP1YHR082C 3090 nt3.66□□□□□ -1.82
SSF1P38789 AIM9YER080W 1884 nt3.65□□□□□ -1.82
SSF1P38789 WIP1YDR374W-A 270 nt3.65□□□□□ -1.83
SSF1P38789 YER039C-AYER039C-A 219 nt3.65□□□□□ -1.83
SSF1P38789 RPS24AYER074W 408 nt3.65□□□□□ -1.83
SSF1P38789 YMR320WYMR320W 306 nt3.65□□□□□ -1.83
SSF1P38789 YMR324CYMR324C 243 nt3.65□□□□□ -1.83
SSF1P38789 CHS2YBR038W 2892 nt3.64□□□□□ -1.83
SSF1P38789 YGL239CYGL239C 315 nt3.64□□□□□ -1.83
SSF1P38789 PRK1YIL095W 2433 nt3.64□□□□□ -1.83
SSF1P38789 RKM1YPL208W 1752 nt3.63□□□□□ -1.83
SSF1P38789 RGC1YPR115W 3252 nt3.63□□□□□ -1.83
SSF1P38789 SPT4YGR063C 309 nt3.63□□□□□ -1.83
SSF1P38789 YHR063W-AYHR063W-A 336 nt3.63□□□□□ -1.83
SSF1P38789 YIL066W-AYIL066W-A 444 nt3.63□□□□□ -1.83
SSF1P38789 YJL020W-AYJL020W-A 258 nt3.63□□□□□ -1.83
SSF1P38789 BMS1YPL217C 3552 nt3.63□□□□□ -1.83
SSF1P38789 KAR3YPR141C 2190 nt3.62□□□□□ -1.83
SSF1P38789 YPR089WYPR089W 2667 nt3.62□□□□□ -1.83
SSF1P38789 YFL063WYFL063W 456 nt3.62□□□□□ -1.83
SSF1P38789 YHR007C-AYHR007C-A 216 nt3.62□□□□□ -1.83
SSF1P38789 RPL20AYMR242C 519 nt3.62□□□□□ -1.83
SSF1P38789 CDC20YGL116W 1833 nt3.62□□□□□ -1.83
SSF1P38789 SAK1YER129W 3429 nt3.61□□□□□ -1.83
SSF1P38789 ECM21YBL101C 3354 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 37.1 ms