Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 HYR1YIR037W 492 nt1.72□□□□□ -2.13
VPS3P23643 YJL133C-AYJL133C-A 225 nt1.72□□□□□ -2.13
VPS3P23643 YJR023CYJR023C 402 nt1.72□□□□□ -2.13
VPS3P23643 SRP21YKL122C 504 nt1.72□□□□□ -2.13
VPS3P23643 YAL066WYAL066W 309 nt1.72□□□□□ -2.13
VPS3P23643 MEI5YPL121C 669 nt1.72□□□□□ -2.13
VPS3P23643 TAZ1YPR140W 1146 nt1.72□□□□□ -2.13
VPS3P23643 YLR422WYLR422W 5799 nt1.72□□□□□ -2.13
VPS3P23643 TDA9YML081W 3756 nt1.71□□□□□ -2.14
VPS3P23643 RBK1YCR036W 1002 nt1.71□□□□□ -2.14
VPS3P23643 DAD1YDR016C 285 nt1.71□□□□□ -2.14
VPS3P23643 YDR248CYDR248C 582 nt1.71□□□□□ -2.14
VPS3P23643 LIN1YHR156C 1023 nt1.71□□□□□ -2.14
VPS3P23643 RAM2YKL019W 951 nt1.71□□□□□ -2.14
VPS3P23643 YHC1YLR298C 696 nt1.71□□□□□ -2.14
VPS3P23643 YOR146WYOR146W 306 nt1.71□□□□□ -2.14
VPS3P23643 BRR2YER172C 6492 nt1.71□□□□□ -2.14
VPS3P23643 AHC2YCR082W 387 nt1.7□□□□□ -2.14
VPS3P23643 CDC50YCR094W 1176 nt1.7□□□□□ -2.14
VPS3P23643 PBP4YDL053C 558 nt1.7□□□□□ -2.14
VPS3P23643 TSA2YDR453C 591 nt1.7□□□□□ -2.14
VPS3P23643 YGL042CYGL042C 306 nt1.7□□□□□ -2.14
VPS3P23643 FSH1YHR049W 732 nt1.7□□□□□ -2.14
VPS3P23643 YHR073W-AYHR073W-A 177 nt1.7□□□□□ -2.14
VPS3P23643 PDP3YLR455W 915 nt1.7□□□□□ -2.14
VPS3P23643 YMR052C-AYMR052C-A 366 nt1.7□□□□□ -2.14
VPS3P23643 YMR230W-AYMR230W-A 189 nt1.7□□□□□ -2.14
VPS3P23643 LSM7YNL147W 348 nt1.7□□□□□ -2.14
VPS3P23643 TFC8YPL007C 1767 nt1.7□□□□□ -2.14
VPS3P23643 YDR261W-AYDR261W-A 1317 nt1.69□□□□□ -2.14
VPS3P23643 NOP10YHR072W-A 177 nt1.69□□□□□ -2.14
VPS3P23643 MRPL44YMR225C 297 nt1.69□□□□□ -2.14
VPS3P23643 HSL1YKL101W 4557 nt1.69□□□□□ -2.14
VPS3P23643 NDD1YOR372C 1665 nt1.68□□□□□ -2.14
VPS3P23643 PET309YLR067C 2898 nt1.68□□□□□ -2.14
VPS3P23643 RPL31AYDL075W 342 nt1.68□□□□□ -2.14
VPS3P23643 VPS74YDR372C 1038 nt1.68□□□□□ -2.14
VPS3P23643 YGL014C-AYGL014C-A 162 nt1.68□□□□□ -2.14
VPS3P23643 RPL40AYIL148W 387 nt1.68□□□□□ -2.14
VPS3P23643 SYM1YLR251W 594 nt1.68□□□□□ -2.14
VPS3P23643 YLR458WYLR458W 381 nt1.68□□□□□ -2.14
VPS3P23643 HHT2YNL031C 411 nt1.68□□□□□ -2.14
VPS3P23643 PMD1YER132C 5262 nt1.68□□□□□ -2.14
VPS3P23643 YOR343W-BYOR343W-B 5313 nt1.68□□□□□ -2.14
VPS3P23643 ADR1YDR216W 3972 nt1.68□□□□□ -2.14
VPS3P23643 NCL1YBL024W 2055 nt1.68□□□□□ -2.14
VPS3P23643 CHS1YNL192W 3396 nt1.67□□□□□ -2.14
VPS3P23643 CTF4YPR135W 2784 nt1.67□□□□□ -2.14
VPS3P23643 snR59snR59 78 nt1.67□□□□□ -2.14
VPS3P23643 YDR286CYDR286C 345 nt1.67□□□□□ -2.14
VPS3P23643 RSM18YER050C 417 nt1.67□□□□□ -2.14
VPS3P23643 BFA1YJR053W 1725 nt1.66□□□□□ -2.14
VPS3P23643 YDL025W-AYDL025W-A 105 nt1.66□□□□□ -2.14
VPS3P23643 YDR115WYDR115W 318 nt1.66□□□□□ -2.14
VPS3P23643 BTT1YDR252W 450 nt1.66□□□□□ -2.14
VPS3P23643 YIL082WYIL082W 873 nt1.66□□□□□ -2.14
VPS3P23643 NCE101YJL205C 162 nt1.66□□□□□ -2.14
VPS3P23643 YPT6YLR262C 648 nt1.66□□□□□ -2.14
VPS3P23643 DCP1YOL149W 696 nt1.66□□□□□ -2.14
VPS3P23643 OST2YOR103C 393 nt1.66□□□□□ -2.14
VPS3P23643 CDC31YOR257W 486 nt1.66□□□□□ -2.14
VPS3P23643 YOR019WYOR019W 2193 nt1.66□□□□□ -2.14
VPS3P23643 TDA2YER071C 381 nt1.65□□□□□ -2.15
VPS3P23643 TAD1YGL243W 1203 nt1.65□□□□□ -2.15
VPS3P23643 SMD1YGR074W 441 nt1.65□□□□□ -2.15
VPS3P23643 YLR285C-AYLR285C-A 171 nt1.65□□□□□ -2.15
VPS3P23643 ERG29YMR134W 714 nt1.65□□□□□ -2.15
VPS3P23643 YPR177CYPR177C 372 nt1.65□□□□□ -2.15
VPS3P23643 RPB5YBR154C 648 nt1.65□□□□□ -2.15
VPS3P23643 POP7YBR167C 423 nt1.65□□□□□ -2.15
VPS3P23643 MGR1YCL044C 1254 nt1.65□□□□□ -2.15
VPS3P23643 IRA1YBR140C 9279 nt1.65□□□□□ -2.15
VPS3P23643 SPO22YIL073C 2928 nt1.64□□□□□ -2.15
VPS3P23643 YGR109W-BYGR109W-B 4644 nt1.64□□□□□ -2.15
VPS3P23643 SHE4YOR035C 2370 nt1.64□□□□□ -2.15
VPS3P23643 MEC1YBR136W 7107 nt1.64□□□□□ -2.15
VPS3P23643 MMS22YLR320W 4365 nt1.64□□□□□ -2.15
VPS3P23643 YGR115CYGR115C 780 nt1.64□□□□□ -2.15
VPS3P23643 YIP1YGR172C 747 nt1.64□□□□□ -2.15
VPS3P23643 IST3YIR005W 447 nt1.64□□□□□ -2.15
VPS3P23643 TAP42YMR028W 1101 nt1.64□□□□□ -2.15
VPS3P23643 SPO24YPR036W-A 204 nt1.64□□□□□ -2.15
VPS3P23643 CAT8YMR280C 4302 nt1.64□□□□□ -2.15
VPS3P23643 DCP2YNL118C 2913 nt1.64□□□□□ -2.15
VPS3P23643 SPC72YAL047C 1869 nt1.64□□□□□ -2.15
VPS3P23643 KCS1YDR017C 3153 nt1.63□□□□□ -2.15
VPS3P23643 SPC110YDR356W 2835 nt1.63□□□□□ -2.15
VPS3P23643 PAU3YCR104W 375 nt1.63□□□□□ -2.15
VPS3P23643 YDL062WYDL062W 426 nt1.63□□□□□ -2.15
VPS3P23643 IRC2YDR112W 309 nt1.63□□□□□ -2.15
VPS3P23643 YIL102CYIL102C 306 nt1.63□□□□□ -2.15
VPS3P23643 ATP18YML081C-A 180 nt1.63□□□□□ -2.15
VPS3P23643 YNL235CYNL235C 432 nt1.63□□□□□ -2.15
VPS3P23643 SLM1YIL105C 2061 nt1.62□□□□□ -2.15
VPS3P23643 snR83snR83 306 nt1.62□□□□□ -2.15
VPS3P23643 FAR7YFR008W 666 nt1.62□□□□□ -2.15
VPS3P23643 PGD1YGL025C 1194 nt1.62□□□□□ -2.15
VPS3P23643 YJL127C-BYJL127C-B 159 nt1.62□□□□□ -2.15
VPS3P23643 ACF4YJR083C 930 nt1.62□□□□□ -2.15
VPS3P23643 DOT6YER088C 2013 nt1.62□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 56.7 ms