Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 LSB5YCL034W 1065 nt8.74□□□□□ -1.01
RUP1Q12242 SOL2YCR073W-A 948 nt8.73□□□□□ -1.01
RUP1Q12242 YJL055WYJL055W 738 nt8.73□□□□□ -1.01
RUP1Q12242 YJL195CYJL195C 702 nt8.73□□□□□ -1.01
RUP1Q12242 NUC1YJL208C 990 nt8.73□□□□□ -1.01
RUP1Q12242 MEX67YPL169C 1800 nt8.73□□□□□ -1.01
RUP1Q12242 DPL1YDR294C 1770 nt8.72□□□□□ -1.01
RUP1Q12242 FUN14YAL008W 597 nt8.71□□□□□ -1.02
RUP1Q12242 RAS2YNL098C 969 nt8.71□□□□□ -1.02
RUP1Q12242 YJL118WYJL118W 660 nt8.7□□□□□ -1.02
RUP1Q12242 SAM3YPL274W 1764 nt8.69□□□□□ -1.02
RUP1Q12242 TIP1YBR067C 633 nt8.69□□□□□ -1.02
RUP1Q12242 RPT5YOR117W 1305 nt8.69□□□□□ -1.02
RUP1Q12242 SNX3YOR357C 489 nt8.68□□□□□ -1.02
RUP1Q12242 YIL177CYIL177C 5277 nt8.66□□□□□ -1.02
RUP1Q12242 LEU4YNL104C 1860 nt8.66□□□□□ -1.02
RUP1Q12242 tD(GUC)BtD(GUC)B 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)DtD(GUC)D 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)G1tD(GUC)G1 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)G2tD(GUC)G2 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)I1tD(GUC)I1 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)I2tD(GUC)I2 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)J1tD(GUC)J1 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)J2tD(GUC)J2 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)J3tD(GUC)J3 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)J4tD(GUC)J4 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)KtD(GUC)K 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)L1tD(GUC)L1 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)L2tD(GUC)L2 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)MtD(GUC)M 72 nt8.65□□□□□ -1.02
RUP1Q12242 tD(GUC)OtD(GUC)O 72 nt8.65□□□□□ -1.02
RUP1Q12242 YDR455CYDR455C 309 nt8.65□□□□□ -1.02
RUP1Q12242 MIM1YOL026C 342 nt8.65□□□□□ -1.02
RUP1Q12242 FET5YFL041W 1869 nt8.64□□□□□ -1.03
RUP1Q12242 THI72YOR192C 1800 nt8.64□□□□□ -1.03
RUP1Q12242 YEL008WYEL008W 381 nt8.63□□□□□ -1.03
RUP1Q12242 STE4YOR212W 1272 nt8.63□□□□□ -1.03
RUP1Q12242 RIB7YBR153W 735 nt8.63□□□□□ -1.03
RUP1Q12242 GAL3YDR009W 1563 nt8.63□□□□□ -1.03
RUP1Q12242 HBS1YKR084C 1836 nt8.63□□□□□ -1.03
RUP1Q12242 YRF1-3YGR296W 5580 nt8.62□□□□□ -1.03
RUP1Q12242 YRF1-6YNL339C 5580 nt8.62□□□□□ -1.03
RUP1Q12242 YRF1-7YPL283C 5580 nt8.62□□□□□ -1.03
RUP1Q12242 MDL2YPL270W 2322 nt8.62□□□□□ -1.03
RUP1Q12242 EAF3YPR023C 1206 nt8.62□□□□□ -1.03
RUP1Q12242 OYE2YHR179W 1203 nt8.61□□□□□ -1.03
RUP1Q12242 YLR349WYLR349W 507 nt8.6□□□□□ -1.03
RUP1Q12242 SAC7YDR389W 1965 nt8.59□□□□□ -1.03
RUP1Q12242 ERG13YML126C 1476 nt8.59□□□□□ -1.03
RUP1Q12242 NPP2YEL016C 1482 nt8.58□□□□□ -1.04
RUP1Q12242 TPS1YBR126C 1488 nt8.58□□□□□ -1.04
RUP1Q12242 LSM5YER146W 282 nt8.57□□□□□ -1.04
RUP1Q12242 BSP1YPR171W 1731 nt8.57□□□□□ -1.04
RUP1Q12242 CCT5YJR064W 1689 nt8.56□□□□□ -1.04
RUP1Q12242 tE(CUC)DtE(CUC)D 72 nt8.56□□□□□ -1.04
RUP1Q12242 tE(CUC)ItE(CUC)I 72 nt8.56□□□□□ -1.04
RUP1Q12242 RAD51YER095W 1203 nt8.56□□□□□ -1.04
RUP1Q12242 YMR265CYMR265C 1386 nt8.56□□□□□ -1.04
RUP1Q12242 DAK2YFL053W 1776 nt8.56□□□□□ -1.04
RUP1Q12242 DUR3YHL016C 2208 nt8.54□□□□□ -1.04
RUP1Q12242 GID7YCL039W 2238 nt8.54□□□□□ -1.04
RUP1Q12242 YDR467CYDR467C 327 nt8.53□□□□□ -1.04
RUP1Q12242 RRT8YOL048C 1029 nt8.53□□□□□ -1.04
RUP1Q12242 MTO1YGL236C 2010 nt8.52□□□□□ -1.05
RUP1Q12242 RPN14YGL004C 1254 nt8.51□□□□□ -1.05
RUP1Q12242 TMA23YMR269W 636 nt8.5□□□□□ -1.05
RUP1Q12242 HAP5YOR358W 729 nt8.5□□□□□ -1.05
RUP1Q12242 ADH7YCR105W 1086 nt8.49□□□□□ -1.05
RUP1Q12242 CPD1YGR247W 720 nt8.49□□□□□ -1.05
RUP1Q12242 SNZ1YMR096W 894 nt8.49□□□□□ -1.05
RUP1Q12242 ORT1YOR130C 879 nt8.49□□□□□ -1.05
RUP1Q12242 HXT11YOL156W 1704 nt8.49□□□□□ -1.05
RUP1Q12242 FIT1YDR534C 1587 nt8.48□□□□□ -1.05
RUP1Q12242 DDI1YER143W 1287 nt8.48□□□□□ -1.05
RUP1Q12242 SUV3YPL029W 2214 nt8.48□□□□□ -1.05
RUP1Q12242 ELO1YJL196C 933 nt8.47□□□□□ -1.05
RUP1Q12242 YNR064CYNR064C 873 nt8.47□□□□□ -1.05
RUP1Q12242 YPR126CYPR126C 309 nt8.47□□□□□ -1.05
RUP1Q12242 TRP2YER090W 1524 nt8.47□□□□□ -1.05
RUP1Q12242 UFD1YGR048W 1086 nt8.46□□□□□ -1.06
RUP1Q12242 THI6YPL214C 1623 nt8.46□□□□□ -1.06
RUP1Q12242 KEL3YPL263C 1956 nt8.44□□□□□ -1.06
RUP1Q12242 IMO32YGR031W 1029 nt8.44□□□□□ -1.06
RUP1Q12242 PAU15YIR041W 375 nt8.44□□□□□ -1.06
RUP1Q12242 YBL095WYBL095W 813 nt8.44□□□□□ -1.06
RUP1Q12242 ESBP6YNL125C 2022 nt8.44□□□□□ -1.06
RUP1Q12242 RFC1YOR217W 2586 nt8.42□□□□□ -1.06
RUP1Q12242 GPM1YKL152C 744 nt8.42□□□□□ -1.06
RUP1Q12242 TAF13YML098W 504 nt8.42□□□□□ -1.06
RUP1Q12242 DUS3YLR401C 2007 nt8.42□□□□□ -1.06
RUP1Q12242 YJR114WYJR114W 393 nt8.41□□□□□ -1.06
RUP1Q12242 GTB1YDR221W 2109 nt8.41□□□□□ -1.06
RUP1Q12242 EMC3YKL207W 762 nt8.4□□□□□ -1.06
RUP1Q12242 MHF1YOL086W-A 273 nt8.4□□□□□ -1.06
RUP1Q12242 IML3YBR107C 738 nt8.4□□□□□ -1.06
RUP1Q12242 CTI6YPL181W 1521 nt8.39□□□□□ -1.07
RUP1Q12242 POP2YNR052C 1302 nt8.39□□□□□ -1.07
RUP1Q12242 snR31snR31 225 nt8.39□□□□□ -1.07
RUP1Q12242 snR4snR4 186 nt8.39□□□□□ -1.07
RUP1Q12242 ADE16YLR028C 1776 nt8.39□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms