Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 VMA11YPL234C 495 nt9.15□□□□□ -0.94
NMD5P46970 TIP1YBR067C 633 nt9.15□□□□□ -0.94
NMD5P46970 MET2YNL277W 1461 nt9.15□□□□□ -0.95
NMD5P46970 ELO1YJL196C 933 nt9.14□□□□□ -0.95
NMD5P46970 SNZ1YMR096W 894 nt9.14□□□□□ -0.95
NMD5P46970 RRT8YOL048C 1029 nt9.14□□□□□ -0.95
NMD5P46970 YFR036W-AYFR036W-A 651 nt9.13□□□□□ -0.95
NMD5P46970 CYT1YOR065W 930 nt9.13□□□□□ -0.95
NMD5P46970 ADE8YDR408C 645 nt9.12□□□□□ -0.95
NMD5P46970 DPL1YDR294C 1770 nt9.11□□□□□ -0.95
NMD5P46970 DAK2YFL053W 1776 nt9.11□□□□□ -0.95
NMD5P46970 SNX3YOR357C 489 nt9.1□□□□□ -0.95
NMD5P46970 YNR064CYNR064C 873 nt9.09□□□□□ -0.95
NMD5P46970 YHL008CYHL008C 1884 nt9.08□□□□□ -0.96
NMD5P46970 SUV3YPL029W 2214 nt9.08□□□□□ -0.96
NMD5P46970 OPI3YJR073C 621 nt9.08□□□□□ -0.96
NMD5P46970 YMR262WYMR262W 942 nt9.08□□□□□ -0.96
NMD5P46970 YJR114WYJR114W 393 nt9.07□□□□□ -0.96
NMD5P46970 RPC31YNL151C 756 nt9.07□□□□□ -0.96
NMD5P46970 NPP1YCR026C 2229 nt9.05□□□□□ -0.96
NMD5P46970 SFL1YOR140W 2301 nt9.05□□□□□ -0.96
NMD5P46970 YPR126CYPR126C 309 nt9.05□□□□□ -0.96
NMD5P46970 RIM2YBR192W 1134 nt9.05□□□□□ -0.96
NMD5P46970 YMR265CYMR265C 1386 nt9.04□□□□□ -0.96
NMD5P46970 AGP3YFL055W 1677 nt9.04□□□□□ -0.96
NMD5P46970 CCT5YJR064W 1689 nt9.03□□□□□ -0.96
NMD5P46970 LEU4YNL104C 1860 nt9.02□□□□□ -0.97
NMD5P46970 HAP5YOR358W 729 nt9.01□□□□□ -0.97
NMD5P46970 KEL3YPL263C 1956 nt8.99□□□□□ -0.97
NMD5P46970 TVP23YDR084C 600 nt8.99□□□□□ -0.97
NMD5P46970 YJL195CYJL195C 702 nt8.99□□□□□ -0.97
NMD5P46970 CTI6YPL181W 1521 nt8.99□□□□□ -0.97
NMD5P46970 SPS100YHR139C 981 nt8.97□□□□□ -0.97
NMD5P46970 CRC1YOR100C 984 nt8.97□□□□□ -0.97
NMD5P46970 HMG2YLR450W 3138 nt8.96□□□□□ -0.97
NMD5P46970 MET1YKR069W 1782 nt8.96□□□□□ -0.98
NMD5P46970 SWT21YNL187W 1074 nt8.94□□□□□ -0.98
NMD5P46970 KRR1YCL059C 951 nt8.93□□□□□ -0.98
NMD5P46970 IML3YBR107C 738 nt8.93□□□□□ -0.98
NMD5P46970 THI72YOR192C 1800 nt8.93□□□□□ -0.98
NMD5P46970 TPO4YOR273C 1980 nt8.93□□□□□ -0.98
NMD5P46970 RPN14YGL004C 1254 nt8.92□□□□□ -0.98
NMD5P46970 NPP2YEL016C 1482 nt8.91□□□□□ -0.98
NMD5P46970 YDR467CYDR467C 327 nt8.9□□□□□ -0.98
NMD5P46970 YKL053WYKL053W 375 nt8.9□□□□□ -0.98
NMD5P46970 ABZ2YMR289W 1125 nt8.9□□□□□ -0.98
NMD5P46970 NBA1YOL070C 1506 nt8.89□□□□□ -0.99
NMD5P46970 BSP1YPR171W 1731 nt8.88□□□□□ -0.99
NMD5P46970 FET5YFL041W 1869 nt8.88□□□□□ -0.99
NMD5P46970 tE(CUC)DtE(CUC)D 72 nt8.88□□□□□ -0.99
NMD5P46970 tE(CUC)ItE(CUC)I 72 nt8.88□□□□□ -0.99
NMD5P46970 FUN14YAL008W 597 nt8.88□□□□□ -0.99
NMD5P46970 KGD2YDR148C 1392 nt8.87□□□□□ -0.99
NMD5P46970 GID7YCL039W 2238 nt8.87□□□□□ -0.99
NMD5P46970 INH1YDL181W 258 nt8.87□□□□□ -0.99
NMD5P46970 PCP1YGR101W 1041 nt8.87□□□□□ -0.99
NMD5P46970 ENO2YHR174W 1314 nt8.86□□□□□ -0.99
NMD5P46970 AMF1YOR378W 1548 nt8.86□□□□□ -0.99
NMD5P46970 YEL008WYEL008W 381 nt8.86□□□□□ -0.99
NMD5P46970 snR31snR31 225 nt8.85□□□□□ -0.99
NMD5P46970 YRF1-2YER190W 5046 nt8.84□□□□□ -0.99
NMD5P46970 MHF1YOL086W-A 273 nt8.84□□□□□ -0.99
NMD5P46970 TPC1YGR096W 945 nt8.83□□□□□ -1
NMD5P46970 THI3YDL080C 1830 nt8.82□□□□□ -1
NMD5P46970 GPM1YKL152C 744 nt8.82□□□□□ -1
NMD5P46970 SAN1YDR143C 1833 nt8.8□□□□□ -1
NMD5P46970 POT1YIL160C 1254 nt8.79□□□□□ -1
NMD5P46970 MTO1YGL236C 2010 nt8.78□□□□□ -1
NMD5P46970 HXK1YFR053C 1458 nt8.78□□□□□ -1
NMD5P46970 TRP2YER090W 1524 nt8.78□□□□□ -1
NMD5P46970 TAF13YML098W 504 nt8.77□□□□□ -1.01
NMD5P46970 YBL095WYBL095W 813 nt8.77□□□□□ -1.01
NMD5P46970 ALD5YER073W 1563 nt8.77□□□□□ -1.01
NMD5P46970 APS2YJR058C 444 nt8.76□□□□□ -1.01
NMD5P46970 NAM8YHR086W 1572 nt8.76□□□□□ -1.01
NMD5P46970 URA8YJR103W 1737 nt8.76□□□□□ -1.01
NMD5P46970 AAT1YKL106W 1356 nt8.74□□□□□ -1.01
NMD5P46970 NIF3YGL221C 867 nt8.74□□□□□ -1.01
NMD5P46970 YMR316C-BYMR316C-B 309 nt8.74□□□□□ -1.01
NMD5P46970 THI6YPL214C 1623 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)BtD(GUC)B 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)DtD(GUC)D 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)G1tD(GUC)G1 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)G2tD(GUC)G2 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)I1tD(GUC)I1 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)I2tD(GUC)I2 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)J1tD(GUC)J1 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)J2tD(GUC)J2 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)J3tD(GUC)J3 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)J4tD(GUC)J4 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)KtD(GUC)K 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)L1tD(GUC)L1 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)L2tD(GUC)L2 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)MtD(GUC)M 72 nt8.73□□□□□ -1.01
NMD5P46970 tD(GUC)OtD(GUC)O 72 nt8.73□□□□□ -1.01
NMD5P46970 SBP1YHL034C 885 nt8.73□□□□□ -1.01
NMD5P46970 HXT11YOL156W 1704 nt8.73□□□□□ -1.01
NMD5P46970 GGA2YHR108W 1758 nt8.73□□□□□ -1.01
NMD5P46970 YLR349WYLR349W 507 nt8.72□□□□□ -1.01
NMD5P46970 LEU2YCL018W 1095 nt8.72□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms