Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 GNP1YDR508C 1992 nt8.63□□□□□ -1.03
LSM5P40089 LSM5YER146W 282 nt8.63□□□□□ -1.03
LSM5P40089 SEN2YLR105C 1134 nt8.62□□□□□ -1.03
LSM5P40089 TUB4YLR212C 1422 nt8.62□□□□□ -1.03
LSM5P40089 ASP3-1YLR155C 1089 nt8.61□□□□□ -1.03
LSM5P40089 ASP3-2YLR157C 1089 nt8.61□□□□□ -1.03
LSM5P40089 ASP3-3YLR158C 1089 nt8.61□□□□□ -1.03
LSM5P40089 ASP3-4YLR160C 1089 nt8.61□□□□□ -1.03
LSM5P40089 CCT2YIL142W 1584 nt8.61□□□□□ -1.03
LSM5P40089 YOR325WYOR325W 474 nt8.6□□□□□ -1.03
LSM5P40089 NAP1YKR048C 1254 nt8.59□□□□□ -1.03
LSM5P40089 MAE1YKL029C 2010 nt8.58□□□□□ -1.04
LSM5P40089 PAR32YDL173W 888 nt8.58□□□□□ -1.04
LSM5P40089 NIF3YGL221C 867 nt8.58□□□□□ -1.04
LSM5P40089 SPS100YHR139C 981 nt8.58□□□□□ -1.04
LSM5P40089 ERG13YML126C 1476 nt8.57□□□□□ -1.04
LSM5P40089 HIS2YFR025C 1008 nt8.57□□□□□ -1.04
LSM5P40089 YFR036W-AYFR036W-A 651 nt8.57□□□□□ -1.04
LSM5P40089 APS2YJR058C 444 nt8.57□□□□□ -1.04
LSM5P40089 ADE8YDR408C 645 nt8.55□□□□□ -1.04
LSM5P40089 LSB6YJL100W 1824 nt8.54□□□□□ -1.04
LSM5P40089 PUP1YOR157C 786 nt8.54□□□□□ -1.04
LSM5P40089 TVP23YDR084C 600 nt8.53□□□□□ -1.04
LSM5P40089 YJL064WYJL064W 396 nt8.53□□□□□ -1.04
LSM5P40089 ENT4YLL038C 744 nt8.53□□□□□ -1.04
LSM5P40089 AIM1YAL046C 357 nt8.52□□□□□ -1.05
LSM5P40089 COQ8YGL119W 1506 nt8.52□□□□□ -1.05
LSM5P40089 PAU19YMR325W 375 nt8.51□□□□□ -1.05
LSM5P40089 SAC7YDR389W 1965 nt8.51□□□□□ -1.05
LSM5P40089 YJR114WYJR114W 393 nt8.5□□□□□ -1.05
LSM5P40089 OPI3YJR073C 621 nt8.49□□□□□ -1.05
LSM5P40089 BET2YPR176C 978 nt8.49□□□□□ -1.05
LSM5P40089 SFP1YLR403W 2052 nt8.49□□□□□ -1.05
LSM5P40089 YMR209CYMR209C 1374 nt8.48□□□□□ -1.05
LSM5P40089 CDD1YLR245C 429 nt8.48□□□□□ -1.05
LSM5P40089 ABZ2YMR289W 1125 nt8.48□□□□□ -1.05
LSM5P40089 DIG1YPL049C 1359 nt8.48□□□□□ -1.05
LSM5P40089 GTB1YDR221W 2109 nt8.47□□□□□ -1.05
LSM5P40089 TOK1YJL093C 2076 nt8.46□□□□□ -1.05
LSM5P40089 UGP1YKL035W 1500 nt8.46□□□□□ -1.05
LSM5P40089 ACO2YJL200C 2370 nt8.46□□□□□ -1.06
LSM5P40089 ARO8YGL202W 1503 nt8.45□□□□□ -1.06
LSM5P40089 YLR046CYLR046C 813 nt8.44□□□□□ -1.06
LSM5P40089 IGD1YFR017C 588 nt8.43□□□□□ -1.06
LSM5P40089 KES1YPL145C 1305 nt8.43□□□□□ -1.06
LSM5P40089 QDR2YIL121W 1629 nt8.43□□□□□ -1.06
LSM5P40089 NAS2YIL007C 663 nt8.42□□□□□ -1.06
LSM5P40089 YNR064CYNR064C 873 nt8.42□□□□□ -1.06
LSM5P40089 SGA1YIL099W 1650 nt8.41□□□□□ -1.06
LSM5P40089 MET2YNL277W 1461 nt8.41□□□□□ -1.06
LSM5P40089 NME1NME1 340 nt8.41□□□□□ -1.06
LSM5P40089 DLD3YEL071W 1491 nt8.4□□□□□ -1.06
LSM5P40089 THP3YPR045C 1413 nt8.4□□□□□ -1.06
LSM5P40089 FSH2YMR222C 672 nt8.39□□□□□ -1.07
LSM5P40089 GAL2YLR081W 1725 nt8.39□□□□□ -1.07
LSM5P40089 CYT1YOR065W 930 nt8.38□□□□□ -1.07
LSM5P40089 YRF1-2YER190W 5046 nt8.38□□□□□ -1.07
LSM5P40089 AMF1YOR378W 1548 nt8.38□□□□□ -1.07
LSM5P40089 ZAP1YJL056C 2643 nt8.37□□□□□ -1.07
LSM5P40089 PCP1YGR101W 1041 nt8.37□□□□□ -1.07
LSM5P40089 ITR2YOL103W 1830 nt8.36□□□□□ -1.07
LSM5P40089 TIM44YIL022W 1296 nt8.36□□□□□ -1.07
LSM5P40089 PSD1YNL169C 1503 nt8.35□□□□□ -1.07
LSM5P40089 FRA1YLL029W 2250 nt8.35□□□□□ -1.07
LSM5P40089 SLG1YOR008C 1137 nt8.35□□□□□ -1.07
LSM5P40089 SWT21YNL187W 1074 nt8.34□□□□□ -1.07
LSM5P40089 TIP1YBR067C 633 nt8.34□□□□□ -1.07
LSM5P40089 KEL3YPL263C 1956 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)DtA(AGC)D 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)FtA(AGC)F 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)GtA(AGC)G 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)HtA(AGC)H 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)JtA(AGC)J 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)K1tA(AGC)K1 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)K2tA(AGC)K2 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)LtA(AGC)L 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)M1tA(AGC)M1 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)M2tA(AGC)M2 73 nt8.33□□□□□ -1.08
LSM5P40089 tA(AGC)PtA(AGC)P 73 nt8.33□□□□□ -1.08
LSM5P40089 YHR219WYHR219W 1875 nt8.33□□□□□ -1.08
LSM5P40089 KRE1YNL322C 942 nt8.33□□□□□ -1.08
LSM5P40089 IPL1YPL209C 1104 nt8.33□□□□□ -1.08
LSM5P40089 GID8YMR135C 1368 nt8.33□□□□□ -1.08
LSM5P40089 ENO2YHR174W 1314 nt8.32□□□□□ -1.08
LSM5P40089 ELO1YJL196C 933 nt8.32□□□□□ -1.08
LSM5P40089 SPE2YOL052C 1191 nt8.32□□□□□ -1.08
LSM5P40089 SFL1YOR140W 2301 nt8.32□□□□□ -1.08
LSM5P40089 DMA2YNL116W 1569 nt8.31□□□□□ -1.08
LSM5P40089 SUV3YPL029W 2214 nt8.31□□□□□ -1.08
LSM5P40089 TPC1YGR096W 945 nt8.3□□□□□ -1.08
LSM5P40089 FLX1YIL134W 936 nt8.3□□□□□ -1.08
LSM5P40089 VMA11YPL234C 495 nt8.3□□□□□ -1.08
LSM5P40089 LEU2YCL018W 1095 nt8.3□□□□□ -1.08
LSM5P40089 YMR265CYMR265C 1386 nt8.3□□□□□ -1.08
LSM5P40089 PHB2YGR231C 933 nt8.29□□□□□ -1.08
LSM5P40089 YHL008CYHL008C 1884 nt8.29□□□□□ -1.08
LSM5P40089 MRS6YOR370C 1812 nt8.28□□□□□ -1.08
LSM5P40089 YKL133CYKL133C 1392 nt8.27□□□□□ -1.09
LSM5P40089 ADH3YMR083W 1128 nt8.27□□□□□ -1.09
LSM5P40089 HAP5YOR358W 729 nt8.27□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 73.6 ms