Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 PMC1YGL006W 3522 nt4.14□□□□□ -1.75
CAF120P53836 SIN4YNL236W 2925 nt4.14□□□□□ -1.75
CAF120P53836 CCT7YJL111W 1653 nt4.14□□□□□ -1.75
CAF120P53836 YDR246W-AYDR246W-A 201 nt4.14□□□□□ -1.75
CAF120P53836 RPL32YBL092W 393 nt4.14□□□□□ -1.75
CAF120P53836 CSE2YNR010W 450 nt4.14□□□□□ -1.75
CAF120P53836 MIP6YHR015W 1980 nt4.14□□□□□ -1.75
CAF120P53836 FLO8YER109C 2400 nt4.14□□□□□ -1.75
CAF120P53836 VID27YNL212W 2349 nt4.13□□□□□ -1.75
CAF120P53836 MNT3YIL014W 1893 nt4.13□□□□□ -1.75
CAF120P53836 FRE4YNR060W 2160 nt4.13□□□□□ -1.75
CAF120P53836 YBR131C-AYBR131C-A 90 nt4.13□□□□□ -1.75
CAF120P53836 RIA1YNL163C 3333 nt4.13□□□□□ -1.75
CAF120P53836 YBR259WYBR259W 2067 nt4.13□□□□□ -1.75
CAF120P53836 BRE4YDL231C 3378 nt4.13□□□□□ -1.75
CAF120P53836 YDR003W-AYDR003W-A 123 nt4.12□□□□□ -1.75
CAF120P53836 RPS0AYGR214W 759 nt4.12□□□□□ -1.75
CAF120P53836 YPL182CYPL182C 384 nt4.12□□□□□ -1.75
CAF120P53836 YKL050CYKL050C 2769 nt4.12□□□□□ -1.75
CAF120P53836 APL4YPR029C 2499 nt4.12□□□□□ -1.75
CAF120P53836 YGR250CYGR250C 2346 nt4.11□□□□□ -1.75
CAF120P53836 SPC105YGL093W 2754 nt4.11□□□□□ -1.75
CAF120P53836 YDR230WYDR230W 348 nt4.11□□□□□ -1.75
CAF120P53836 IES6YEL044W 501 nt4.11□□□□□ -1.75
CAF120P53836 UPC2YDR213W 2742 nt4.11□□□□□ -1.75
CAF120P53836 SPO21YOL091W 1830 nt4.11□□□□□ -1.75
CAF120P53836 VAC14YLR386W 2643 nt4.1□□□□□ -1.75
CAF120P53836 GPI1YGR216C 1830 nt4.1□□□□□ -1.75
CAF120P53836 YLL066W-BYLL066W-B 171 nt4.1□□□□□ -1.75
CAF120P53836 RPL36AYMR194W 303 nt4.1□□□□□ -1.75
CAF120P53836 DIP2YLR129W 2832 nt4.1□□□□□ -1.75
CAF120P53836 SEC5YDR166C 2916 nt4.09□□□□□ -1.75
CAF120P53836 YER091C-AYER091C-A 222 nt4.09□□□□□ -1.75
CAF120P53836 tQ(UUG)CtQ(UUG)C 72 nt4.09□□□□□ -1.75
CAF120P53836 tQ(UUG)D1tQ(UUG)D1 72 nt4.09□□□□□ -1.75
CAF120P53836 tQ(UUG)D2tQ(UUG)D2 72 nt4.09□□□□□ -1.75
CAF120P53836 tQ(UUG)D3tQ(UUG)D3 72 nt4.09□□□□□ -1.75
CAF120P53836 tQ(UUG)E1tQ(UUG)E1 72 nt4.09□□□□□ -1.75
CAF120P53836 tQ(UUG)HtQ(UUG)H 72 nt4.09□□□□□ -1.75
CAF120P53836 tQ(UUG)LtQ(UUG)L 72 nt4.09□□□□□ -1.75
CAF120P53836 NTC20YBR188C 423 nt4.09□□□□□ -1.75
CAF120P53836 CWH43YCR017C 2862 nt4.09□□□□□ -1.75
CAF120P53836 PBS2YJL128C 2007 nt4.09□□□□□ -1.76
CAF120P53836 tC(GCA)BtC(GCA)B 72 nt4.08□□□□□ -1.76
CAF120P53836 tC(GCA)GtC(GCA)G 72 nt4.08□□□□□ -1.76
CAF120P53836 tC(GCA)P1tC(GCA)P1 72 nt4.08□□□□□ -1.76
CAF120P53836 tC(GCA)P2tC(GCA)P2 72 nt4.08□□□□□ -1.76
CAF120P53836 RPL33BYOR234C 324 nt4.08□□□□□ -1.76
CAF120P53836 NOP53YPL146C 1368 nt4.08□□□□□ -1.76
CAF120P53836 ISM1YPL040C 3009 nt4.08□□□□□ -1.76
CAF120P53836 FAS2YPL231W 5664 nt4.07□□□□□ -1.76
CAF120P53836 YEL073CYEL073C 324 nt4.07□□□□□ -1.76
CAF120P53836 tT(UGU)Q1tT(UGU)Q1 76 nt4.07□□□□□ -1.76
CAF120P53836 SGF11YPL047W 300 nt4.07□□□□□ -1.76
CAF120P53836 KIP3YGL216W 2418 nt4.07□□□□□ -1.76
CAF120P53836 SSP1YHR184W 1716 nt4.07□□□□□ -1.76
CAF120P53836 TIF4631YGR162W 2859 nt4.06□□□□□ -1.76
CAF120P53836 RPS29BYDL061C 171 nt4.06□□□□□ -1.76
CAF120P53836 YHR032C-AYHR032C-A 120 nt4.06□□□□□ -1.76
CAF120P53836 YIR030W-AYIR030W-A 384 nt4.06□□□□□ -1.76
CAF120P53836 RDN5-1RDN5-1 121 nt4.06□□□□□ -1.76
CAF120P53836 ISA1YLL027W 753 nt4.06□□□□□ -1.76
CAF120P53836 RDN5-6RDN5-6 121 nt4.06□□□□□ -1.76
CAF120P53836 MDM20YOL076W 2391 nt4.06□□□□□ -1.76
CAF120P53836 MES1YGR264C 2256 nt4.05□□□□□ -1.76
CAF120P53836 SAR1YPL218W 573 nt4.05□□□□□ -1.76
CAF120P53836 SSQ1YLR369W 1974 nt4.05□□□□□ -1.76
CAF120P53836 PDE2YOR360C 1581 nt4.05□□□□□ -1.76
CAF120P53836 TCO89YPL180W 2400 nt4.04□□□□□ -1.76
CAF120P53836 FUN12YAL035W 3009 nt4.04□□□□□ -1.76
CAF120P53836 SRP72YPL210C 1923 nt4.04□□□□□ -1.76
CAF120P53836 NPC2YDL046W 522 nt4.04□□□□□ -1.76
CAF120P53836 CCW14YLR390W-A 717 nt4.04□□□□□ -1.76
CAF120P53836 GOT1YMR292W 417 nt4.04□□□□□ -1.76
CAF120P53836 KIN4YOR233W 2403 nt4.04□□□□□ -1.76
CAF120P53836 NUP60YAR002W 1620 nt4.03□□□□□ -1.76
CAF120P53836 YJL022WYJL022W 309 nt4.03□□□□□ -1.76
CAF120P53836 RPL6AYML073C 531 nt4.03□□□□□ -1.76
CAF120P53836 YBL028CYBL028C 321 nt4.03□□□□□ -1.76
CAF120P53836 MCD4YKL165C 2760 nt4.03□□□□□ -1.76
CAF120P53836 HDA3YPR179C 1968 nt4.03□□□□□ -1.76
CAF120P53836 IRC3YDR332W 2070 nt4.02□□□□□ -1.77
CAF120P53836 VHS3YOR054C 2025 nt4.02□□□□□ -1.77
CAF120P53836 YBR099CYBR099C 384 nt4.02□□□□□ -1.77
CAF120P53836 snR45snR45 172 nt4.02□□□□□ -1.77
CAF120P53836 TPS2YDR074W 2691 nt4.02□□□□□ -1.77
CAF120P53836 LRG1YDL240W 3054 nt4.02□□□□□ -1.77
CAF120P53836 YPK9YOR291W 4419 nt4.02□□□□□ -1.77
CAF120P53836 CDC45YLR103C 1953 nt4.02□□□□□ -1.77
CAF120P53836 PIG1YLR273C 1947 nt4.01□□□□□ -1.77
CAF120P53836 EMC1YCL045C 2283 nt4.01□□□□□ -1.77
CAF120P53836 LCD1YDR499W 2244 nt4.01□□□□□ -1.77
CAF120P53836 YCR095W-AYCR095W-A 159 nt4.01□□□□□ -1.77
CAF120P53836 YKL162C-AYKL162C-A 153 nt4.01□□□□□ -1.77
CAF120P53836 SRL3YKR091W 741 nt4.01□□□□□ -1.77
CAF120P53836 YPR092WYPR092W 306 nt4.01□□□□□ -1.77
CAF120P53836 YBR277CYBR277C 402 nt4.01□□□□□ -1.77
CAF120P53836 SLM2YNL047C 1971 nt4.01□□□□□ -1.77
CAF120P53836 EBS1YDR206W 2655 nt4□□□□□ -1.77
CAF120P53836 ARO80YDR421W 2853 nt4□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms