Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 KSP1YHR082C 3090 nt2.39□□□□□ -2.03
RPT4P53549 MLH1YMR167W 2310 nt2.39□□□□□ -2.03
RPT4P53549 TOR1YJR066W 7413 nt2.39□□□□□ -2.03
RPT4P53549 YPR089WYPR089W 2667 nt2.38□□□□□ -2.03
RPT4P53549 INP51YIL002C 2841 nt2.38□□□□□ -2.03
RPT4P53549 PHO2YDL106C 1680 nt2.38□□□□□ -2.03
RPT4P53549 YNL018CYNL018C 1839 nt2.38□□□□□ -2.03
RPT4P53549 KRE33YNL132W 3171 nt2.38□□□□□ -2.03
RPT4P53549 YCR081C-AYCR081C-A 237 nt2.38□□□□□ -2.03
RPT4P53549 YMR194C-AYMR194C-A 225 nt2.38□□□□□ -2.03
RPT4P53549 SAP185YJL098W 3177 nt2.38□□□□□ -2.03
RPT4P53549 SSD1YDR293C 3753 nt2.37□□□□□ -2.03
RPT4P53549 SSF1YHR066W 1362 nt2.37□□□□□ -2.03
RPT4P53549 UFD4YKL010C 4452 nt2.37□□□□□ -2.03
RPT4P53549 TSA2YDR453C 591 nt2.37□□□□□ -2.03
RPT4P53549 YGR293CYGR293C 462 nt2.37□□□□□ -2.03
RPT4P53549 BUD19YJL188C 309 nt2.37□□□□□ -2.03
RPT4P53549 ARV1YLR242C 966 nt2.37□□□□□ -2.03
RPT4P53549 TRS130YMR218C 3309 nt2.37□□□□□ -2.03
RPT4P53549 BRE1YDL074C 2103 nt2.36□□□□□ -2.03
RPT4P53549 YKR078WYKR078W 1758 nt2.36□□□□□ -2.03
RPT4P53549 RRP12YPL012W 3687 nt2.36□□□□□ -2.03
RPT4P53549 RPL29YFR032C-A 180 nt2.36□□□□□ -2.03
RPT4P53549 RAD6YGL058W 519 nt2.36□□□□□ -2.03
RPT4P53549 YGL165CYGL165C 579 nt2.36□□□□□ -2.03
RPT4P53549 EMC4YGL231C 573 nt2.36□□□□□ -2.03
RPT4P53549 ACB1YGR037C 264 nt2.36□□□□□ -2.03
RPT4P53549 YIR020CYIR020C 303 nt2.36□□□□□ -2.03
RPT4P53549 YMR320WYMR320W 306 nt2.36□□□□□ -2.03
RPT4P53549 ARF3YOR094W 552 nt2.36□□□□□ -2.03
RPT4P53549 YPR096CYPR096C 303 nt2.36□□□□□ -2.03
RPT4P53549 PRP6YBR055C 2700 nt2.36□□□□□ -2.03
RPT4P53549 HSC82YMR186W 2118 nt2.36□□□□□ -2.03
RPT4P53549 BI4Q0120 1917 nt2.36□□□□□ -2.03
RPT4P53549 YDR210W-AYDR210W-A 1317 nt2.36□□□□□ -2.03
RPT4P53549 YGL015CYGL015C 393 nt2.35□□□□□ -2.03
RPT4P53549 BET4YJL031C 984 nt2.35□□□□□ -2.03
RPT4P53549 YLR252WYLR252W 306 nt2.35□□□□□ -2.03
RPT4P53549 YLR271WYLR271W 825 nt2.35□□□□□ -2.03
RPT4P53549 ECM25YJL201W 1800 nt2.35□□□□□ -2.03
RPT4P53549 YDL016CYDL016C 303 nt2.34□□□□□ -2.03
RPT4P53549 YER038W-AYER038W-A 381 nt2.34□□□□□ -2.03
RPT4P53549 YJR023CYJR023C 402 nt2.34□□□□□ -2.03
RPT4P53549 ATP3YBR039W 936 nt2.34□□□□□ -2.03
RPT4P53549 CSF1YLR087C 8877 nt2.34□□□□□ -2.04
RPT4P53549 NDD1YOR372C 1665 nt2.34□□□□□ -2.04
RPT4P53549 PES4YFR023W 1836 nt2.33□□□□□ -2.04
RPT4P53549 snR84snR84 550 nt2.33□□□□□ -2.04
RPT4P53549 YER172C-AYER172C-A 381 nt2.33□□□□□ -2.04
RPT4P53549 YIL029CYIL029C 429 nt2.33□□□□□ -2.04
RPT4P53549 ROY1YMR258C 1662 nt2.33□□□□□ -2.04
RPT4P53549 SPF1YEL031W 3648 nt2.33□□□□□ -2.04
RPT4P53549 ASG1YIL130W 2895 nt2.33□□□□□ -2.04
RPT4P53549 YFR016CYFR016C 3702 nt2.33□□□□□ -2.04
RPT4P53549 SNU114YKL173W 3027 nt2.33□□□□□ -2.04
RPT4P53549 VPS16YPL045W 2397 nt2.32□□□□□ -2.04
RPT4P53549 EDS1YBR033W 2760 nt2.32□□□□□ -2.04
RPT4P53549 YER175W-AYER175W-A 165 nt2.32□□□□□ -2.04
RPT4P53549 TWF1YGR080W 999 nt2.32□□□□□ -2.04
RPT4P53549 AFB1YLR040C 675 nt2.32□□□□□ -2.04
RPT4P53549 MEI5YPL121C 669 nt2.32□□□□□ -2.04
RPT4P53549 YPR172WYPR172W 603 nt2.32□□□□□ -2.04
RPT4P53549 IRA2YOL081W 9240 nt2.32□□□□□ -2.04
RPT4P53549 CBF2YGR140W 2871 nt2.31□□□□□ -2.04
RPT4P53549 AHC2YCR082W 387 nt2.31□□□□□ -2.04
RPT4P53549 YER079C-AYER079C-A 339 nt2.31□□□□□ -2.04
RPT4P53549 IST3YIR005W 447 nt2.31□□□□□ -2.04
RPT4P53549 HYR1YIR037W 492 nt2.31□□□□□ -2.04
RPT4P53549 RLP24YLR009W 600 nt2.31□□□□□ -2.04
RPT4P53549 YHC1YLR298C 696 nt2.31□□□□□ -2.04
RPT4P53549 DGR1YNL130C-A 147 nt2.31□□□□□ -2.04
RPT4P53549 YNL146C-AYNL146C-A 195 nt2.31□□□□□ -2.04
RPT4P53549 IGO1YNL157W 507 nt2.31□□□□□ -2.04
RPT4P53549 YBR071WYBR071W 636 nt2.31□□□□□ -2.04
RPT4P53549 RGL1YPL066W 1440 nt2.31□□□□□ -2.04
RPT4P53549 SDC1YDR469W 528 nt2.3□□□□□ -2.04
RPT4P53549 PRM8YGL053W 714 nt2.3□□□□□ -2.04
RPT4P53549 SPO13YHR014W 876 nt2.3□□□□□ -2.04
RPT4P53549 YIL030W-AYIL030W-A 339 nt2.3□□□□□ -2.04
RPT4P53549 YIL058WYIL058W 285 nt2.3□□□□□ -2.04
RPT4P53549 ILM1YJR118C 612 nt2.3□□□□□ -2.04
RPT4P53549 YBR277CYBR277C 402 nt2.3□□□□□ -2.04
RPT4P53549 ARP7YPR034W 1434 nt2.3□□□□□ -2.04
RPT4P53549 SNX41YDR425W 1878 nt2.3□□□□□ -2.04
RPT4P53549 BER1YLR412W 825 nt2.29□□□□□ -2.04
RPT4P53549 RCN2YOR220W 798 nt2.29□□□□□ -2.04
RPT4P53549 BNI1YNL271C 5862 nt2.29□□□□□ -2.04
RPT4P53549 YEL043WYEL043W 2871 nt2.29□□□□□ -2.04
RPT4P53549 SEC16YPL085W 6588 nt2.29□□□□□ -2.04
RPT4P53549 GIP3YPL137C 3831 nt2.28□□□□□ -2.04
RPT4P53549 GIS1YDR096W 2685 nt2.28□□□□□ -2.04
RPT4P53549 YJL070CYJL070C 2667 nt2.28□□□□□ -2.04
RPT4P53549 YOR343W-AYOR343W-A 1317 nt2.28□□□□□ -2.04
RPT4P53549 MRP10YDL045W-A 288 nt2.28□□□□□ -2.04
RPT4P53549 YRB1YDR002W 606 nt2.28□□□□□ -2.04
RPT4P53549 PET191YJR034W 327 nt2.28□□□□□ -2.04
RPT4P53549 UBX4YMR067C 1251 nt2.28□□□□□ -2.04
RPT4P53549 YPL080CYPL080C 327 nt2.28□□□□□ -2.04
RPT4P53549 NUP100YKL068W 2880 nt2.28□□□□□ -2.04
RPT4P53549 STH1YIL126W 4080 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 57 ms