Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 PAU20YOL161C 363 nt0.15□□□□□ -2.39
TRA1P38811 PAU3YCR104W 375 nt0.15□□□□□ -2.39
TRA1P38811 YOL085W-AYOL085W-A 213 nt0.15□□□□□ -2.39
TRA1P38811 YPR159C-AYPR159C-A 102 nt0.15□□□□□ -2.39
TRA1P38811 YLL054CYLL054C 2532 nt0.15□□□□□ -2.39
TRA1P38811 CDC27YBL084C 2277 nt0.15□□□□□ -2.39
TRA1P38811 ZRG8YER033C 3231 nt0.14□□□□□ -2.39
TRA1P38811 YMR320WYMR320W 306 nt0.14□□□□□ -2.39
TRA1P38811 YIL058WYIL058W 285 nt0.14□□□□□ -2.39
TRA1P38811 ECM18YDR125C 1362 nt0.14□□□□□ -2.39
TRA1P38811 PBP4YDL053C 558 nt0.14□□□□□ -2.39
TRA1P38811 snR76snR76 109 nt0.14□□□□□ -2.39
TRA1P38811 JJJ3YJR097W 519 nt0.14□□□□□ -2.39
TRA1P38811 URB2YJR041C 3525 nt0.14□□□□□ -2.39
TRA1P38811 TOF2YKR010C 2316 nt0.13□□□□□ -2.39
TRA1P38811 COF1YLL050C 432 nt0.13□□□□□ -2.39
TRA1P38811 IST1YNL265C 897 nt0.13□□□□□ -2.39
TRA1P38811 YOR292CYOR292C 930 nt0.13□□□□□ -2.39
TRA1P38811 BTN2YGR142W 1233 nt0.13□□□□□ -2.39
TRA1P38811 YMR052C-AYMR052C-A 366 nt0.13□□□□□ -2.39
TRA1P38811 RPL32YBL092W 393 nt0.12□□□□□ -2.39
TRA1P38811 YPL034WYPL034W 498 nt0.12□□□□□ -2.39
TRA1P38811 RIM20YOR275C 1986 nt0.12□□□□□ -2.39
TRA1P38811 YDR132CYDR132C 1488 nt0.12□□□□□ -2.39
TRA1P38811 EFG1YGR271C-A 702 nt0.11□□□□□ -2.39
TRA1P38811 YAR075WYAR075W 474 nt0.11□□□□□ -2.39
TRA1P38811 CAF20YOR276W 486 nt0.11□□□□□ -2.39
TRA1P38811 CBF2YGR140W 2871 nt0.11□□□□□ -2.39
TRA1P38811 YOR053WYOR053W 342 nt0.11□□□□□ -2.39
TRA1P38811 HLR1YDR528W 1272 nt0.1□□□□□ -2.39
TRA1P38811 INP2YMR163C 2118 nt0.1□□□□□ -2.39
TRA1P38811 HHT2YNL031C 411 nt0.1□□□□□ -2.39
TRA1P38811 RPL31AYDL075W 342 nt0.1□□□□□ -2.39
TRA1P38811 YIP1YGR172C 747 nt0.1□□□□□ -2.39
TRA1P38811 VPS74YDR372C 1038 nt0.09□□□□□ -2.39
TRA1P38811 CUP9YPL177C 921 nt0.09□□□□□ -2.39
TRA1P38811 YEL028WYEL028W 462 nt0.09□□□□□ -2.4
TRA1P38811 AFR1YDR085C 1863 nt0.09□□□□□ -2.4
TRA1P38811 YJL049WYJL049W 1353 nt0.09□□□□□ -2.4
TRA1P38811 YLR416CYLR416C 399 nt0.09□□□□□ -2.4
TRA1P38811 IES4YOR189W 351 nt0.09□□□□□ -2.4
TRA1P38811 YDR018CYDR018C 1191 nt0.08□□□□□ -2.4
TRA1P38811 YDR401WYDR401W 564 nt0.08□□□□□ -2.4
TRA1P38811 YNR077CYNR077C 255 nt0.08□□□□□ -2.4
TRA1P38811 YLR307C-AYLR307C-A 264 nt0.08□□□□□ -2.4
TRA1P38811 SLK19YOR195W 2466 nt0.07□□□□□ -2.4
TRA1P38811 BUD30YDL151C 582 nt0.07□□□□□ -2.4
TRA1P38811 IPI3YNL182C 1668 nt0.07□□□□□ -2.4
TRA1P38811 NCA2YPR155C 1851 nt0.07□□□□□ -2.4
TRA1P38811 YIL030W-AYIL030W-A 339 nt0.07□□□□□ -2.4
TRA1P38811 YJL202CYJL202C 348 nt0.06□□□□□ -2.4
TRA1P38811 HHT1YBR010W 411 nt0.06□□□□□ -2.4
TRA1P38811 YPL135C-AYPL135C-A 174 nt0.06□□□□□ -2.4
TRA1P38811 TBS1YBR150C 3285 nt0.06□□□□□ -2.4
TRA1P38811 HMLALPHA1YCL066W 528 nt0.06□□□□□ -2.4
TRA1P38811 MATALPHA1YCR040W 528 nt0.06□□□□□ -2.4
TRA1P38811 BFA1YJR053W 1725 nt0.06□□□□□ -2.4
TRA1P38811 SAG1YJR004C 1953 nt0.06□□□□□ -2.4
TRA1P38811 21S_rRNA21S_rRNA 3296 nt0.06□□□□□ -2.4
TRA1P38811 BNA7YDR428C 786 nt0.05□□□□□ -2.4
TRA1P38811 YGR050CYGR050C 357 nt0.05□□□□□ -2.4
TRA1P38811 COX3Q0275 810 nt0.05□□□□□ -2.4
TRA1P38811 RPL38YLR325C 237 nt0.05□□□□□ -2.4
TRA1P38811 YNL043CYNL043C 321 nt0.05□□□□□ -2.4
TRA1P38811 LST4YKL176C 2487 nt0.05□□□□□ -2.4
TRA1P38811 INA17YPL099C 549 nt0.05□□□□□ -2.4
TRA1P38811 DAS2YDR020C 699 nt0.04□□□□□ -2.4
TRA1P38811 CLC1YGR167W 702 nt0.04□□□□□ -2.4
TRA1P38811 GPI2YPL076W 843 nt0.04□□□□□ -2.4
TRA1P38811 YBR062CYBR062C 543 nt0.04□□□□□ -2.4
TRA1P38811 YDR355CYDR355C 303 nt0.04□□□□□ -2.4
TRA1P38811 UBP3YER151C 2739 nt0.04□□□□□ -2.4
TRA1P38811 TRM2YKR056W 1920 nt0.04□□□□□ -2.4
TRA1P38811 RPC11YDR045C 333 nt0.03□□□□□ -2.4
TRA1P38811 YGR149WYGR149W 1299 nt0.03□□□□□ -2.4
TRA1P38811 ATG5YPL149W 885 nt0.03□□□□□ -2.4
TRA1P38811 YKL069WYKL069W 543 nt0.03□□□□□ -2.4
TRA1P38811 BUR2YLR226W 1188 nt0.03□□□□□ -2.4
TRA1P38811 SRG1SRG1 551 nt0.03□□□□□ -2.41
TRA1P38811 CIC1YHR052W 1131 nt0.03□□□□□ -2.41
TRA1P38811 REX3YLR107W 1215 nt0.03□□□□□ -2.41
TRA1P38811 YLR225CYLR225C 1224 nt0.03□□□□□ -2.41
TRA1P38811 VMA22YHR060W 546 nt0.02□□□□□ -2.41
TRA1P38811 RPL37AYLR185W 267 nt0.02□□□□□ -2.41
TRA1P38811 YNL109WYNL109W 546 nt0.02□□□□□ -2.41
TRA1P38811 YPL225WYPL225W 441 nt0.02□□□□□ -2.41
TRA1P38811 YPR063CYPR063C 423 nt0.02□□□□□ -2.41
TRA1P38811 SLU7YDR088C 1149 nt0.02□□□□□ -2.41
TRA1P38811 RGI1YER067W 486 nt0.02□□□□□ -2.41
TRA1P38811 YLR290CYLR290C 834 nt0.02□□□□□ -2.41
TRA1P38811 YDL206WYDL206W 2289 nt0.02□□□□□ -2.41
TRA1P38811 BAG7YOR134W 1230 nt0.01□□□□□ -2.41
TRA1P38811 RED1YLR263W 2484 nt0.01□□□□□ -2.41
TRA1P38811 YEL075CYEL075C 369 nt0.01□□□□□ -2.41
TRA1P38811 MEI4YER044C-A 1227 nt0.01□□□□□ -2.41
TRA1P38811 YER189WYER189W 369 nt0.01□□□□□ -2.41
TRA1P38811 LAG1YHL003C 1236 nt0.01□□□□□ -2.41
TRA1P38811 BTT1YDR252W 450 nt0□□□□□ -2.41
TRA1P38811 EBP2YKL172W 1284 nt0□□□□□ -2.41
TRA1P38811 MRPL50YNR022C 420 nt0□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms