Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 GOT1YMR292W 417 nt3.91□□□□□ -1.78
SSF1P38789 ATP3YBR039W 936 nt3.91□□□□□ -1.78
SSF1P38789 EGD1YPL037C 474 nt3.91□□□□□ -1.78
SSF1P38789 REC8YPR007C 2043 nt3.91□□□□□ -1.78
SSF1P38789 MSS11YMR164C 2277 nt3.91□□□□□ -1.78
SSF1P38789 DUF1YOL087C 3351 nt3.91□□□□□ -1.78
SSF1P38789 ABP140YOR239W 1887 nt3.9□□□□□ -1.78
SSF1P38789 YAK1YJL141C 2424 nt3.9□□□□□ -1.78
SSF1P38789 TRM2YKR056W 1920 nt3.9□□□□□ -1.78
SSF1P38789 MSL1YIR009W 336 nt3.9□□□□□ -1.79
SSF1P38789 HYR1YIR037W 492 nt3.9□□□□□ -1.79
SSF1P38789 NUP82YJL061W 2142 nt3.9□□□□□ -1.79
SSF1P38789 NCE101YJL205C 162 nt3.9□□□□□ -1.79
SSF1P38789 RPL9BYNL067W 576 nt3.9□□□□□ -1.79
SSF1P38789 SSE1YPL106C 2082 nt3.9□□□□□ -1.79
SSF1P38789 IKI3YLR384C 4050 nt3.89□□□□□ -1.79
SSF1P38789 ADK1YDR226W 669 nt3.89□□□□□ -1.79
SSF1P38789 YER097WYER097W 330 nt3.89□□□□□ -1.79
SSF1P38789 PSK2YOL045W 3306 nt3.89□□□□□ -1.79
SSF1P38789 SWI1YPL016W 3945 nt3.89□□□□□ -1.79
SSF1P38789 YMR317WYMR317W 3423 nt3.88□□□□□ -1.79
SSF1P38789 YAT2YER024W 2772 nt3.88□□□□□ -1.79
SSF1P38789 snR65snR65 100 nt3.88□□□□□ -1.79
SSF1P38789 PSF1YDR013W 627 nt3.88□□□□□ -1.79
SSF1P38789 PAU14YIL176C 363 nt3.88□□□□□ -1.79
SSF1P38789 PAU1YJL223C 363 nt3.88□□□□□ -1.79
SSF1P38789 MGR1YCL044C 1254 nt3.88□□□□□ -1.79
SSF1P38789 GYP7YDL234C 2241 nt3.88□□□□□ -1.79
SSF1P38789 SNT1YCR033W 3681 nt3.88□□□□□ -1.79
SSF1P38789 XRS2YDR369C 2565 nt3.87□□□□□ -1.79
SSF1P38789 YDR102CYDR102C 333 nt3.87□□□□□ -1.79
SSF1P38789 VPS52YDR484W 1926 nt3.87□□□□□ -1.79
SSF1P38789 AUS1YOR011W 4185 nt3.87□□□□□ -1.79
SSF1P38789 YDL041WYDL041W 354 nt3.86□□□□□ -1.79
SSF1P38789 FAP7YDL166C 594 nt3.86□□□□□ -1.79
SSF1P38789 TIM11YDR322C-A 291 nt3.86□□□□□ -1.79
SSF1P38789 AST2YER101C 1293 nt3.86□□□□□ -1.79
SSF1P38789 YKL033W-AYKL033W-A 711 nt3.86□□□□□ -1.79
SSF1P38789 COX7YMR256C 183 nt3.86□□□□□ -1.79
SSF1P38789 ATP15YPL271W 189 nt3.86□□□□□ -1.79
SSF1P38789 YOR296WYOR296W 3870 nt3.86□□□□□ -1.79
SSF1P38789 MAK21YDR060W 3078 nt3.85□□□□□ -1.79
SSF1P38789 TIM18YOR297C 579 nt3.85□□□□□ -1.79
SSF1P38789 VAS1YGR094W 3315 nt3.85□□□□□ -1.79
SSF1P38789 BAS1YKR099W 2436 nt3.85□□□□□ -1.79
SSF1P38789 NPR3YHL023C 3441 nt3.85□□□□□ -1.79
SSF1P38789 MET5YJR137C 4329 nt3.84□□□□□ -1.79
SSF1P38789 TSC11YER093C 4293 nt3.84□□□□□ -1.79
SSF1P38789 YDR366CYDR366C 399 nt3.84□□□□□ -1.79
SSF1P38789 RPL39YJL189W 156 nt3.84□□□□□ -1.79
SSF1P38789 PKH1YDR490C 2301 nt3.84□□□□□ -1.79
SSF1P38789 POL3YDL102W 3294 nt3.84□□□□□ -1.79
SSF1P38789 ATG21YPL100W 1491 nt3.84□□□□□ -1.8
SSF1P38789 PFK26YIL107C 2484 nt3.84□□□□□ -1.8
SSF1P38789 YHR078WYHR078W 1659 nt3.84□□□□□ -1.8
SSF1P38789 YJL181WYJL181W 1836 nt3.84□□□□□ -1.8
SSF1P38789 YJL202CYJL202C 348 nt3.83□□□□□ -1.8
SSF1P38789 TMA22YJR014W 597 nt3.83□□□□□ -1.8
SSF1P38789 YLR458WYLR458W 381 nt3.83□□□□□ -1.8
SSF1P38789 ROX1YPR065W 1107 nt3.83□□□□□ -1.8
SSF1P38789 snR42snR42 351 nt3.83□□□□□ -1.8
SSF1P38789 STU1YBL034C 4542 nt3.83□□□□□ -1.8
SSF1P38789 SKT5YBL061C 2091 nt3.83□□□□□ -1.8
SSF1P38789 NUP159YIL115C 4383 nt3.83□□□□□ -1.8
SSF1P38789 MTR4YJL050W 3222 nt3.82□□□□□ -1.8
SSF1P38789 YER023C-AYER023C-A 213 nt3.82□□□□□ -1.8
SSF1P38789 HMF1YER057C 390 nt3.82□□□□□ -1.8
SSF1P38789 YOR282WYOR282W 321 nt3.82□□□□□ -1.8
SSF1P38789 CHO2YGR157W 2610 nt3.82□□□□□ -1.8
SSF1P38789 PSO2YMR137C 1986 nt3.82□□□□□ -1.8
SSF1P38789 PUF4YGL014W 2667 nt3.81□□□□□ -1.8
SSF1P38789 YFR056CYFR056C 369 nt3.81□□□□□ -1.8
SSF1P38789 AYR1YIL124W 894 nt3.81□□□□□ -1.8
SSF1P38789 GPI14YJR013W 1212 nt3.81□□□□□ -1.8
SSF1P38789 RAM2YKL019W 951 nt3.81□□□□□ -1.8
SSF1P38789 RPS18BYML026C 441 nt3.81□□□□□ -1.8
SSF1P38789 NAN1YPL126W 2691 nt3.81□□□□□ -1.8
SSF1P38789 TCP1YDR212W 1680 nt3.81□□□□□ -1.8
SSF1P38789 PSY2YNL201C 2577 nt3.8□□□□□ -1.8
SSF1P38789 YHR080CYHR080C 4038 nt3.8□□□□□ -1.8
SSF1P38789 tC(GCA)BtC(GCA)B 72 nt3.8□□□□□ -1.8
SSF1P38789 tC(GCA)GtC(GCA)G 72 nt3.8□□□□□ -1.8
SSF1P38789 tC(GCA)P1tC(GCA)P1 72 nt3.8□□□□□ -1.8
SSF1P38789 tC(GCA)P2tC(GCA)P2 72 nt3.8□□□□□ -1.8
SSF1P38789 YFL032WYFL032W 321 nt3.8□□□□□ -1.8
SSF1P38789 YMR158W-BYMR158W-B 321 nt3.8□□□□□ -1.8
SSF1P38789 PGA1YNL158W 597 nt3.8□□□□□ -1.8
SSF1P38789 IRC23YOR044W 474 nt3.8□□□□□ -1.8
SSF1P38789 YPL182CYPL182C 384 nt3.8□□□□□ -1.8
SSF1P38789 snR36snR36 182 nt3.8□□□□□ -1.8
SSF1P38789 VPS41YDR080W 2979 nt3.8□□□□□ -1.8
SSF1P38789 DSE4YNR067C 3354 nt3.8□□□□□ -1.8
SSF1P38789 ITC1YGL133W 3795 nt3.79□□□□□ -1.8
SSF1P38789 YDL011CYDL011C 324 nt3.79□□□□□ -1.8
SSF1P38789 UTP30YKR060W 825 nt3.79□□□□□ -1.8
SSF1P38789 AAD16YFL057C 459 nt3.78□□□□□ -1.8
SSF1P38789 CCW14YLR390W-A 717 nt3.78□□□□□ -1.8
SSF1P38789 GIS2YNL255C 462 nt3.78□□□□□ -1.8
SSF1P38789 IRC10YOL015W 1761 nt3.78□□□□□ -1.8
SSF1P38789 RRP5YMR229C 5190 nt3.78□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 90.9 ms