Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 IRC23YOR044W 474 nt3.62□□□□□ -1.83
PUF4P25339 APC11YDL008W 498 nt3.61□□□□□ -1.83 RIP-Chip
PUF4P25339 YJL182CYJL182C 318 nt3.61□□□□□ -1.83
PUF4P25339 RPS28BYLR264W 204 nt3.61□□□□□ -1.83
PUF4P25339 YBR137WYBR137W 540 nt3.61□□□□□ -1.83
PUF4P25339 SET1YHR119W 3243 nt3.61□□□□□ -1.83
PUF4P25339 DNM1YLL001W 2274 nt3.61□□□□□ -1.83
PUF4P25339 YDR210W-BYDR210W-B 5313 nt3.61□□□□□ -1.83
PUF4P25339 YDR261W-BYDR261W-B 5313 nt3.61□□□□□ -1.83
PUF4P25339 YFL002W-AYFL002W-A 5313 nt3.61□□□□□ -1.83
PUF4P25339 YGR161W-BYGR161W-B 5313 nt3.61□□□□□ -1.83
PUF4P25339 YLR410W-BYLR410W-B 5313 nt3.61□□□□□ -1.83
PUF4P25339 YCL019WYCL019W 5313 nt3.61□□□□□ -1.83
PUF4P25339 PDC2YDR081C 2778 nt3.6□□□□□ -1.83
PUF4P25339 RPS23AYGR118W 438 nt3.6□□□□□ -1.83
PUF4P25339 RPS22BYLR367W 393 nt3.6□□□□□ -1.83
PUF4P25339 EGD1YPL037C 474 nt3.6□□□□□ -1.83
PUF4P25339 EXO84YBR102C 2262 nt3.6□□□□□ -1.83
PUF4P25339 SIP3YNL257C 3690 nt3.6□□□□□ -1.83
PUF4P25339 YLR352WYLR352W 2424 nt3.6□□□□□ -1.83
PUF4P25339 SMC3YJL074C 3693 nt3.59□□□□□ -1.83
PUF4P25339 NUP159YIL115C 4383 nt3.59□□□□□ -1.83 RIP-Chip
PUF4P25339 HPA3YEL066W 540 nt3.59□□□□□ -1.83
PUF4P25339 MTC3YGL226W 372 nt3.59□□□□□ -1.83
PUF4P25339 HYR1YIR037W 492 nt3.59□□□□□ -1.83
PUF4P25339 YLR466C-BYLR466C-B 117 nt3.59□□□□□ -1.83
PUF4P25339 YPL229WYPL229W 621 nt3.59□□□□□ -1.83 RIP-Chip
PUF4P25339 YPR108W-AYPR108W-A 213 nt3.59□□□□□ -1.83
PUF4P25339 snR51snR51 107 nt3.59□□□□□ -1.83
PUF4P25339 LEU3YLR451W 2661 nt3.59□□□□□ -1.83
PUF4P25339 NPR1YNL183C 2373 nt3.59□□□□□ -1.84
PUF4P25339 YAK1YJL141C 2424 nt3.58□□□□□ -1.84
PUF4P25339 YDL007C-AYDL007C-A 258 nt3.58□□□□□ -1.84
PUF4P25339 YRB1YDR002W 606 nt3.58□□□□□ -1.84
PUF4P25339 ISD11YER048W-A 285 nt3.58□□□□□ -1.84
PUF4P25339 ANB1YJR047C 474 nt3.58□□□□□ -1.84
PUF4P25339 YOR073W-AYOR073W-A 234 nt3.58□□□□□ -1.84
PUF4P25339 SWD3YBR175W 948 nt3.58□□□□□ -1.84
PUF4P25339 YCL023CYCL023C 348 nt3.58□□□□□ -1.84
PUF4P25339 PAC1YOR269W 1485 nt3.58□□□□□ -1.84
PUF4P25339 RAD2YGR258C 3096 nt3.57□□□□□ -1.84
PUF4P25339 YDR169C-AYDR169C-A 150 nt3.57□□□□□ -1.84
PUF4P25339 FMP32YFL046W 624 nt3.57□□□□□ -1.84
PUF4P25339 XRN1YGL173C 4587 nt3.57□□□□□ -1.84
PUF4P25339 PAM16YJL104W 450 nt3.57□□□□□ -1.84 RIP-Chip
PUF4P25339 RPL9BYNL067W 576 nt3.57□□□□□ -1.84 RIP-Chip
PUF4P25339 PKH1YDR490C 2301 nt3.56□□□□□ -1.84
PUF4P25339 YHR078WYHR078W 1659 nt3.56□□□□□ -1.84
PUF4P25339 RPL30YGL030W 318 nt3.56□□□□□ -1.84
PUF4P25339 YHL006W-AYHL006W-A 354 nt3.56□□□□□ -1.84
PUF4P25339 tT(UGU)Q1tT(UGU)Q1 76 nt3.56□□□□□ -1.84
PUF4P25339 YLR458WYLR458W 381 nt3.56□□□□□ -1.84
PUF4P25339 YMR307C-AYMR307C-A 195 nt3.56□□□□□ -1.84
PUF4P25339 TIM12YBR091C 330 nt3.56□□□□□ -1.84
PUF4P25339 VPS53YJL029C 2469 nt3.56□□□□□ -1.84
PUF4P25339 SPP382YLR424W 2127 nt3.56□□□□□ -1.84
PUF4P25339 AI2Q0055 2565 nt3.56□□□□□ -1.84
PUF4P25339 SSY1YDR160W 2559 nt3.55□□□□□ -1.84
PUF4P25339 APQ12YIL040W 417 nt3.55□□□□□ -1.84
PUF4P25339 YBR085C-AYBR085C-A 258 nt3.55□□□□□ -1.84
PUF4P25339 snR191snR191 274 nt3.55□□□□□ -1.84
PUF4P25339 TCP1YDR212W 1680 nt3.55□□□□□ -1.84 RIP-Chip
PUF4P25339 MDV1YJL112W 2145 nt3.55□□□□□ -1.84
PUF4P25339 ROM1YGR070W 3468 nt3.54□□□□□ -1.84
PUF4P25339 YGL041CYGL041C 204 nt3.54□□□□□ -1.84
PUF4P25339 YGR151CYGR151C 336 nt3.54□□□□□ -1.84
PUF4P25339 RPS7AYOR096W 573 nt3.54□□□□□ -1.84
PUF4P25339 POM152YMR129W 4014 nt3.54□□□□□ -1.84 RIP-Chip
PUF4P25339 TLC1TLC1 1301 nt3.53□□□□□ -1.84
PUF4P25339 TIM8YJR135W-A 264 nt3.53□□□□□ -1.84
PUF4P25339 PSY1YKL076C 384 nt3.53□□□□□ -1.84
PUF4P25339 RPL26AYLR344W 384 nt3.53□□□□□ -1.84
PUF4P25339 ENA2YDR039C 3276 nt3.53□□□□□ -1.84
PUF4P25339 ENA1YDR040C 3276 nt3.53□□□□□ -1.84
PUF4P25339 COX1Q0045 1605 nt3.52□□□□□ -1.85
PUF4P25339 FAS1YKL182W 6156 nt3.52□□□□□ -1.85
PUF4P25339 CDH1YGL003C 1701 nt3.52□□□□□ -1.85
PUF4P25339 FAR1YJL157C 2493 nt3.51□□□□□ -1.85
PUF4P25339 RKM1YPL208W 1752 nt3.51□□□□□ -1.85
PUF4P25339 FUS1YCL027W 1539 nt3.51□□□□□ -1.85 RIP-Chip
PUF4P25339 VTC4YJL012C 2166 nt3.51□□□□□ -1.85
PUF4P25339 YIL066W-AYIL066W-A 444 nt3.51□□□□□ -1.85
PUF4P25339 YOR170WYOR170W 306 nt3.51□□□□□ -1.85
PUF4P25339 BMS1YPL217C 3552 nt3.51□□□□□ -1.85
PUF4P25339 PCF11YDR228C 1881 nt3.51□□□□□ -1.85
PUF4P25339 RIX1YHR197W 2292 nt3.51□□□□□ -1.85
PUF4P25339 STE23YLR389C 3084 nt3.5□□□□□ -1.85
PUF4P25339 YLL032CYLL032C 2478 nt3.5□□□□□ -1.85
PUF4P25339 IOC3YFR013W 2364 nt3.5□□□□□ -1.85
PUF4P25339 WIP1YDR374W-A 270 nt3.5□□□□□ -1.85
PUF4P25339 RPS21AYKR057W 264 nt3.5□□□□□ -1.85
PUF4P25339 TMA10YLR327C 261 nt3.5□□□□□ -1.85
PUF4P25339 GIS2YNL255C 462 nt3.5□□□□□ -1.85
PUF4P25339 snR42snR42 351 nt3.5□□□□□ -1.85
PUF4P25339 YTA7YGR270W 4140 nt3.5□□□□□ -1.85
PUF4P25339 SHQ1YIL104C 1524 nt3.49□□□□□ -1.85
PUF4P25339 MET10YFR030W 3108 nt3.49□□□□□ -1.85
PUF4P25339 FAP7YDL166C 594 nt3.49□□□□□ -1.85 RIP-Chip
PUF4P25339 YIL058WYIL058W 285 nt3.49□□□□□ -1.85
PUF4P25339 ABF2YMR072W 552 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms