Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.77■□□□□ 0.76
KRT78Q8N1N4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 AC011767.1-201ENST00000617410 1153 ntBASIC19.77■□□□□ 0.76
KRT78Q8N1N4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KRT78Q8N1N4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KRT78Q8N1N4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 AC007322.4-201ENST00000509611 723 ntBASIC19.76■□□□□ 0.75
KRT78Q8N1N4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT78Q8N1N4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 AC027702.1-201ENST00000563810 1770 ntBASIC19.75■□□□□ 0.75
KRT78Q8N1N4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 AC007225.1-201ENST00000566331 1836 ntBASIC19.75■□□□□ 0.75
KRT78Q8N1N4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT78Q8N1N4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 AL162412.1-201ENST00000567129 965 ntBASIC19.74■□□□□ 0.75
KRT78Q8N1N4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT78Q8N1N4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 FP700111.2-201ENST00000619190 1892 ntBASIC19.73■□□□□ 0.75
KRT78Q8N1N4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT78Q8N1N4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 344.2 ms