Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
PPARGC1BQ86YN6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PPARGC1BQ86YN6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC32.31■■■□□ 2.76
PPARGC1BQ86YN6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 CNN2P6-201ENST00000439038 900 ntBASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 AC080038.1-201ENST00000611274 1154 ntBASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PPARGC1BQ86YN6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 BID-214ENST00000617586 542 ntTSL 5 BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC32.29■■■□□ 2.76
PPARGC1BQ86YN6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PPARGC1BQ86YN6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 AC091799.1-201ENST00000422823 811 ntBASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 CDCA4P2-201ENST00000441182 718 ntBASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 TERF1P5-201ENST00000477545 1207 ntBASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PPARGC1BQ86YN6 AC121338.2-201ENST00000622535 1744 ntBASIC32.26■■■□□ 2.76
PPARGC1BQ86YN6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
PPARGC1BQ86YN6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PPARGC1BQ86YN6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC32.26■■■□□ 2.76
PPARGC1BQ86YN6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC32.26■■■□□ 2.76
PPARGC1BQ86YN6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 AC073111.5-205ENST00000641717 521 ntBASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
PPARGC1BQ86YN6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC32.25■■■□□ 2.75
PPARGC1BQ86YN6 PCDHAC2-203ENST00000615316 3011 ntBASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PPARGC1BQ86YN6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms