Protein–RNA interactions for Protein: Q12217

TY1A-BR, Transposon Ty1-BR Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-BRQ12217 NUP85YJR042W 2235 nt4.38□□□□□ -1.71
TY1A-BRQ12217 YDR261C-DYDR261C-D 4815 nt4.38□□□□□ -1.71
TY1A-BRQ12217 GPI1YGR216C 1830 nt4.37□□□□□ -1.71
TY1A-BRQ12217 YRA1YDR381W 681 nt4.37□□□□□ -1.71
TY1A-BRQ12217 GOT1YMR292W 417 nt4.37□□□□□ -1.71
TY1A-BRQ12217 YNL103W-AYNL103W-A 90 nt4.37□□□□□ -1.71
TY1A-BRQ12217 YPR092WYPR092W 306 nt4.37□□□□□ -1.71
TY1A-BRQ12217 YPR195CYPR195C 330 nt4.37□□□□□ -1.71
TY1A-BRQ12217 PDR15YDR406W 4590 nt4.37□□□□□ -1.71
TY1A-BRQ12217 SEA4YBL104C 3117 nt4.37□□□□□ -1.71
TY1A-BRQ12217 YGR266WYGR266W 2106 nt4.37□□□□□ -1.71
TY1A-BRQ12217 DOA1YKL213C 2148 nt4.37□□□□□ -1.71
TY1A-BRQ12217 PUF6YDR496C 1971 nt4.36□□□□□ -1.71
TY1A-BRQ12217 ROT2YBR229C 2865 nt4.36□□□□□ -1.71
TY1A-BRQ12217 snR79snR79 84 nt4.36□□□□□ -1.71
TY1A-BRQ12217 PMP2YEL017C-A 132 nt4.36□□□□□ -1.71
TY1A-BRQ12217 YHR071C-AYHR071C-A 321 nt4.36□□□□□ -1.71
TY1A-BRQ12217 YIL059CYIL059C 366 nt4.36□□□□□ -1.71
TY1A-BRQ12217 DLS1YJL065C 504 nt4.36□□□□□ -1.71
TY1A-BRQ12217 RPS17AYML024W 411 nt4.36□□□□□ -1.71
TY1A-BRQ12217 SGF11YPL047W 300 nt4.36□□□□□ -1.71
TY1A-BRQ12217 RED1YLR263W 2484 nt4.36□□□□□ -1.71
TY1A-BRQ12217 YAP1YML007W 1953 nt4.36□□□□□ -1.71
TY1A-BRQ12217 RBK1YCR036W 1002 nt4.35□□□□□ -1.71
TY1A-BRQ12217 YDL022C-AYDL022C-A 249 nt4.35□□□□□ -1.71
TY1A-BRQ12217 ULI1YFR026C 510 nt4.35□□□□□ -1.71
TY1A-BRQ12217 USE1YGL098W 738 nt4.35□□□□□ -1.71
TY1A-BRQ12217 YIR030W-AYIR030W-A 384 nt4.35□□□□□ -1.71
TY1A-BRQ12217 NUP82YJL061W 2142 nt4.35□□□□□ -1.71
TY1A-BRQ12217 GON7YJL184W 372 nt4.35□□□□□ -1.71
TY1A-BRQ12217 YPR146CYPR146C 330 nt4.35□□□□□ -1.71
TY1A-BRQ12217 MSH1YHR120W 2880 nt4.34□□□□□ -1.71
TY1A-BRQ12217 YGL074CYGL074C 327 nt4.34□□□□□ -1.71
TY1A-BRQ12217 YPR053CYPR053C 456 nt4.34□□□□□ -1.71
TY1A-BRQ12217 HOT1YMR172W 2160 nt4.34□□□□□ -1.72
TY1A-BRQ12217 YPK1YKL126W 2043 nt4.33□□□□□ -1.72
TY1A-BRQ12217 RPL38YLR325C 237 nt4.33□□□□□ -1.72
TY1A-BRQ12217 ASC1YMR116C 960 nt4.33□□□□□ -1.72
TY1A-BRQ12217 SNC2YOR327C 348 nt4.33□□□□□ -1.72
TY1A-BRQ12217 CDC24YAL041W 2565 nt4.33□□□□□ -1.72
TY1A-BRQ12217 IOC3YFR013W 2364 nt4.33□□□□□ -1.72
TY1A-BRQ12217 ARK1YNL020C 1917 nt4.33□□□□□ -1.72
TY1A-BRQ12217 GEP4YHR100C 558 nt4.32□□□□□ -1.72
TY1A-BRQ12217 DNF2YDR093W 4839 nt4.32□□□□□ -1.72
TY1A-BRQ12217 TRZ1YKR079C 2517 nt4.32□□□□□ -1.72
TY1A-BRQ12217 GPI13YLL031C 3054 nt4.32□□□□□ -1.72
TY1A-BRQ12217 TCP1YDR212W 1680 nt4.32□□□□□ -1.72
TY1A-BRQ12217 RPL23AYBL087C 414 nt4.31□□□□□ -1.72
TY1A-BRQ12217 CDC27YBL084C 2277 nt4.31□□□□□ -1.72
TY1A-BRQ12217 NMA111YNL123W 2994 nt4.31□□□□□ -1.72
TY1A-BRQ12217 AIM21YIR003W 2040 nt4.31□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)CtN(GUU)C 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)FtN(GUU)F 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)GtN(GUU)G 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)KtN(GUU)K 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)LtN(GUU)L 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)N1tN(GUU)N1 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)N2tN(GUU)N2 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)O1tN(GUU)O1 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)O2tN(GUU)O2 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 tN(GUU)PtN(GUU)P 74 nt4.3□□□□□ -1.72
TY1A-BRQ12217 YIL058WYIL058W 285 nt4.3□□□□□ -1.72
TY1A-BRQ12217 YNL097W-AYNL097W-A 156 nt4.3□□□□□ -1.72
TY1A-BRQ12217 FEX2YPL279C 1128 nt4.3□□□□□ -1.72
TY1A-BRQ12217 TIF4632YGL049C 2745 nt4.3□□□□□ -1.72
TY1A-BRQ12217 ACE2YLR131C 2313 nt4.3□□□□□ -1.72
TY1A-BRQ12217 GRS2YPR081C 1857 nt4.3□□□□□ -1.72
TY1A-BRQ12217 LEU3YLR451W 2661 nt4.29□□□□□ -1.72
TY1A-BRQ12217 MSR1YHR091C 1932 nt4.29□□□□□ -1.72
TY1A-BRQ12217 YEL045CYEL045C 426 nt4.29□□□□□ -1.72
TY1A-BRQ12217 GIP4YAL031C 2283 nt4.29□□□□□ -1.72
TY1A-BRQ12217 PEX1YKL197C 3132 nt4.28□□□□□ -1.72
TY1A-BRQ12217 YRM1YOR172W 2361 nt4.28□□□□□ -1.72
TY1A-BRQ12217 YCR047W-AYCR047W-A 207 nt4.28□□□□□ -1.72
TY1A-BRQ12217 snR61snR61 90 nt4.28□□□□□ -1.72
TY1A-BRQ12217 YKL156C-AYKL156C-A 117 nt4.28□□□□□ -1.72
TY1A-BRQ12217 YML007C-AYML007C-A 111 nt4.28□□□□□ -1.72
TY1A-BRQ12217 VTC4YJL012C 2166 nt4.28□□□□□ -1.72
TY1A-BRQ12217 PTA1YAL043C 2358 nt4.28□□□□□ -1.72
TY1A-BRQ12217 YOL057WYOL057W 2136 nt4.27□□□□□ -1.73
TY1A-BRQ12217 PMP3YDR276C 168 nt4.27□□□□□ -1.73
TY1A-BRQ12217 YIL142C-AYIL142C-A 333 nt4.27□□□□□ -1.73
TY1A-BRQ12217 UPS1YLR193C 528 nt4.27□□□□□ -1.73
TY1A-BRQ12217 KHA1YJL094C 2622 nt4.26□□□□□ -1.73
TY1A-BRQ12217 GDE1YPL110C 3672 nt4.26□□□□□ -1.73
TY1A-BRQ12217 TGL4YKR089C 2733 nt4.26□□□□□ -1.73
TY1A-BRQ12217 SSS1YDR086C 243 nt4.26□□□□□ -1.73
TY1A-BRQ12217 ERP6YGL002W 651 nt4.26□□□□□ -1.73
TY1A-BRQ12217 YNL067W-BYNL067W-B 141 nt4.26□□□□□ -1.73
TY1A-BRQ12217 GAL4YPL248C 2646 nt4.26□□□□□ -1.73
TY1A-BRQ12217 PAN1YIR006C 4443 nt4.26□□□□□ -1.73
TY1A-BRQ12217 GCD6YDR211W 2139 nt4.25□□□□□ -1.73
TY1A-BRQ12217 RPS18AYDR450W 441 nt4.25□□□□□ -1.73
TY1A-BRQ12217 CDH1YGL003C 1701 nt4.25□□□□□ -1.73
TY1A-BRQ12217 NAG1YGR031C-A 492 nt4.25□□□□□ -1.73
TY1A-BRQ12217 YGR269WYGR269W 327 nt4.25□□□□□ -1.73
TY1A-BRQ12217 ABF1YKL112W 2196 nt4.25□□□□□ -1.73
TY1A-BRQ12217 CWH43YCR017C 2862 nt4.25□□□□□ -1.73
TY1A-BRQ12217 PIG1YLR273C 1947 nt4.25□□□□□ -1.73
TY1A-BRQ12217 DIS3YOL021C 3006 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 55.9 ms