Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 SWA2YDR320C 2007 nt3.09□□□□□ -1.91
BRE1Q07457 YDR250CYDR250C 276 nt3.09□□□□□ -1.91
BRE1Q07457 TIF35YDR429C 825 nt3.09□□□□□ -1.91
BRE1Q07457 tW(CCA)G1tW(CCA)G1 72 nt3.09□□□□□ -1.91
BRE1Q07457 tW(CCA)G2tW(CCA)G2 72 nt3.09□□□□□ -1.91
BRE1Q07457 tW(CCA)JtW(CCA)J 72 nt3.09□□□□□ -1.91
BRE1Q07457 tW(CCA)KtW(CCA)K 72 nt3.09□□□□□ -1.91
BRE1Q07457 tW(CCA)MtW(CCA)M 72 nt3.09□□□□□ -1.91
BRE1Q07457 tW(CCA)PtW(CCA)P 72 nt3.09□□□□□ -1.91
BRE1Q07457 YJL127C-BYJL127C-B 159 nt3.09□□□□□ -1.91
BRE1Q07457 RLF2YPR018W 1821 nt3.09□□□□□ -1.92
BRE1Q07457 GDI1YER136W 1356 nt3.09□□□□□ -1.92
BRE1Q07457 YDR239CYDR239C 2364 nt3.09□□□□□ -1.92
BRE1Q07457 PSK2YOL045W 3306 nt3.09□□□□□ -1.92
BRE1Q07457 ESL1YIL151C 3357 nt3.09□□□□□ -1.92
BRE1Q07457 SEC7YDR170C 6030 nt3.08□□□□□ -1.92
BRE1Q07457 SNF12YNR023W 1701 nt3.08□□□□□ -1.92
BRE1Q07457 snR76snR76 109 nt3.08□□□□□ -1.92
BRE1Q07457 YAP3YHL009C 993 nt3.08□□□□□ -1.92
BRE1Q07457 YHR086W-AYHR086W-A 162 nt3.08□□□□□ -1.92
BRE1Q07457 YNL046WYNL046W 519 nt3.08□□□□□ -1.92
BRE1Q07457 FLO11YIR019C 4104 nt3.08□□□□□ -1.92
BRE1Q07457 TOM1YDR457W 9807 nt3.07□□□□□ -1.92
BRE1Q07457 SLN1YIL147C 3663 nt3.07□□□□□ -1.92
BRE1Q07457 ORC2YBR060C 1863 nt3.07□□□□□ -1.92
BRE1Q07457 YDR209CYDR209C 414 nt3.07□□□□□ -1.92
BRE1Q07457 RAD6YGL058W 519 nt3.07□□□□□ -1.92
BRE1Q07457 RUF22RUF22 515 nt3.07□□□□□ -1.92
BRE1Q07457 RIO2YNL207W 1278 nt3.07□□□□□ -1.92
BRE1Q07457 YPL080CYPL080C 327 nt3.07□□□□□ -1.92
BRE1Q07457 PTP3YER075C 2787 nt3.07□□□□□ -1.92
BRE1Q07457 SDC25YLL016W 3147 nt3.07□□□□□ -1.92
BRE1Q07457 INP52YNL106C 3552 nt3.07□□□□□ -1.92
BRE1Q07457 LEU3YLR451W 2661 nt3.06□□□□□ -1.92
BRE1Q07457 SLH1YGR271W 5904 nt3.06□□□□□ -1.92
BRE1Q07457 BNA7YDR428C 786 nt3.06□□□□□ -1.92
BRE1Q07457 YER038W-AYER038W-A 381 nt3.06□□□□□ -1.92
BRE1Q07457 RPL29YFR032C-A 180 nt3.06□□□□□ -1.92
BRE1Q07457 PDR1YGL013C 3207 nt3.06□□□□□ -1.92
BRE1Q07457 YJR157WYJR157W 363 nt3.06□□□□□ -1.92
BRE1Q07457 YKL202WYKL202W 582 nt3.06□□□□□ -1.92
BRE1Q07457 PAU23YLR037C 375 nt3.06□□□□□ -1.92
BRE1Q07457 SYM1YLR251W 594 nt3.06□□□□□ -1.92
BRE1Q07457 LSM2YBL026W 288 nt3.06□□□□□ -1.92
BRE1Q07457 NOP15YNL110C 663 nt3.06□□□□□ -1.92
BRE1Q07457 ESF2YNR054C 951 nt3.06□□□□□ -1.92
BRE1Q07457 YPL039WYPL039W 951 nt3.06□□□□□ -1.92
BRE1Q07457 ACM1YPL267W 630 nt3.06□□□□□ -1.92
BRE1Q07457 PFF1YBR074W 2931 nt3.06□□□□□ -1.92
BRE1Q07457 HAA1YPR008W 2085 nt3.05□□□□□ -1.92
BRE1Q07457 CYR1YJL005W 6081 nt3.05□□□□□ -1.92
BRE1Q07457 AHC2YCR082W 387 nt3.05□□□□□ -1.92
BRE1Q07457 YEL030C-AYEL030C-A 315 nt3.05□□□□□ -1.92
BRE1Q07457 YER189WYER189W 369 nt3.05□□□□□ -1.92
BRE1Q07457 COX13YGL191W 390 nt3.05□□□□□ -1.92
BRE1Q07457 RPI1YIL119C 1224 nt3.05□□□□□ -1.92
BRE1Q07457 NSL1YPL233W 651 nt3.05□□□□□ -1.92
BRE1Q07457 KRE33YNL132W 3171 nt3.05□□□□□ -1.92
BRE1Q07457 PSD2YGR170W 3417 nt3.04□□□□□ -1.92
BRE1Q07457 PUF4YGL014W 2667 nt3.04□□□□□ -1.92
BRE1Q07457 REV3YPL167C 4515 nt3.04□□□□□ -1.92
BRE1Q07457 RPS17BYDR447C 411 nt3.04□□□□□ -1.92
BRE1Q07457 YFL019CYFL019C 354 nt3.04□□□□□ -1.92
BRE1Q07457 YHR032W-AYHR032W-A 180 nt3.04□□□□□ -1.92
BRE1Q07457 YLR171WYLR171W 390 nt3.04□□□□□ -1.92
BRE1Q07457 YHC1YLR298C 696 nt3.04□□□□□ -1.92
BRE1Q07457 CTK3YML112W 891 nt3.04□□□□□ -1.92
BRE1Q07457 EDS1YBR033W 2760 nt3.04□□□□□ -1.92
BRE1Q07457 ASM4YDL088C 1587 nt3.04□□□□□ -1.92
BRE1Q07457 BAS1YKR099W 2436 nt3.03□□□□□ -1.92
BRE1Q07457 ESC1YMR219W 4977 nt3.03□□□□□ -1.92
BRE1Q07457 NAB6YML117W 3405 nt3.03□□□□□ -1.92
BRE1Q07457 YKL066WYKL066W 444 nt3.03□□□□□ -1.92
BRE1Q07457 YLR264C-AYLR264C-A 117 nt3.03□□□□□ -1.92
BRE1Q07457 YMR052C-AYMR052C-A 366 nt3.03□□□□□ -1.92
BRE1Q07457 DDR48YMR173W 1293 nt3.03□□□□□ -1.92
BRE1Q07457 YPR177CYPR177C 372 nt3.03□□□□□ -1.92
BRE1Q07457 UTP13YLR222C 2454 nt3.03□□□□□ -1.92
BRE1Q07457 FKS3YMR306W 5358 nt3.03□□□□□ -1.92
BRE1Q07457 NPR3YHL023C 3441 nt3.02□□□□□ -1.93
BRE1Q07457 TSA2YDR453C 591 nt3.02□□□□□ -1.93
BRE1Q07457 YHL006W-AYHL006W-A 354 nt3.02□□□□□ -1.93
BRE1Q07457 BIG1YHR101C 1008 nt3.02□□□□□ -1.93
BRE1Q07457 RRT1YBL048W 312 nt3.02□□□□□ -1.93
BRE1Q07457 YNL324WYNL324W 396 nt3.02□□□□□ -1.93
BRE1Q07457 YNR021WYNR021W 1215 nt3.02□□□□□ -1.93
BRE1Q07457 TPS2YDR074W 2691 nt3.01□□□□□ -1.93
BRE1Q07457 snR70snR70 164 nt3.01□□□□□ -1.93
BRE1Q07457 SMB1YER029C 591 nt3.01□□□□□ -1.93
BRE1Q07457 YER119C-AYER119C-A 372 nt3.01□□□□□ -1.93
BRE1Q07457 RTS3YGR161C 792 nt3.01□□□□□ -1.93
BRE1Q07457 YBR085C-AYBR085C-A 258 nt3.01□□□□□ -1.93
BRE1Q07457 KIN82YCR091W 2163 nt3.01□□□□□ -1.93
BRE1Q07457 BUB1YGR188C 3066 nt3.01□□□□□ -1.93
BRE1Q07457 YNL018CYNL018C 1839 nt3□□□□□ -1.93
BRE1Q07457 PDR3YBL005W 2931 nt3□□□□□ -1.93
BRE1Q07457 HOS4YIL112W 3252 nt3□□□□□ -1.93
BRE1Q07457 BI2Q0110 1272 nt3□□□□□ -1.93
BRE1Q07457 YGR050CYGR050C 357 nt3□□□□□ -1.93
BRE1Q07457 ECL1YGR146C 636 nt3□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 38.4 ms