Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 RPO41YFL036W 4056 nt2.7□□□□□ -1.98
SUB1P54000 GIN4YDR507C 3429 nt2.7□□□□□ -1.98
SUB1P54000 TAE2YPL009C 3117 nt2.7□□□□□ -1.98
SUB1P54000 TMA20YER007C-A 546 nt2.7□□□□□ -1.98
SUB1P54000 YFL012WYFL012W 447 nt2.7□□□□□ -1.98
SUB1P54000 TPM2YIL138C 486 nt2.7□□□□□ -1.98
SUB1P54000 PEP8YJL053W 1140 nt2.7□□□□□ -1.98
SUB1P54000 RPL19BYBL027W 570 nt2.7□□□□□ -1.98
SUB1P54000 YOL029CYOL029C 606 nt2.7□□□□□ -1.98
SUB1P54000 YOR333CYOR333C 417 nt2.7□□□□□ -1.98
SUB1P54000 PAM1YDR251W 2493 nt2.7□□□□□ -1.98
SUB1P54000 SEC26YDR238C 2922 nt2.7□□□□□ -1.98
SUB1P54000 BRO1YPL084W 2535 nt2.7□□□□□ -1.98
SUB1P54000 NEW1YPL226W 3591 nt2.69□□□□□ -1.98
SUB1P54000 ATG9YDL149W 2994 nt2.69□□□□□ -1.98
SUB1P54000 UBC5YDR059C 447 nt2.69□□□□□ -1.98
SUB1P54000 HMF1YER057C 390 nt2.69□□□□□ -1.98
SUB1P54000 RPL23BYER117W 414 nt2.69□□□□□ -1.98
SUB1P54000 ERP6YGL002W 651 nt2.69□□□□□ -1.98
SUB1P54000 YMR304C-AYMR304C-A 351 nt2.69□□□□□ -1.98
SUB1P54000 CAT5YOR125C 702 nt2.69□□□□□ -1.98
SUB1P54000 NUP120YKL057C 3114 nt2.69□□□□□ -1.98
SUB1P54000 RSE1YML049C 4086 nt2.69□□□□□ -1.98
SUB1P54000 MPH1YIR002C 2982 nt2.68□□□□□ -1.98
SUB1P54000 YDL025W-AYDL025W-A 105 nt2.68□□□□□ -1.98
SUB1P54000 snR9snR9 187 nt2.68□□□□□ -1.98
SUB1P54000 YER079C-AYER079C-A 339 nt2.68□□□□□ -1.98
SUB1P54000 YGL014C-AYGL014C-A 162 nt2.68□□□□□ -1.98
SUB1P54000 SNC1YAL030W 354 nt2.68□□□□□ -1.98
SUB1P54000 TRL1YJL087C 2484 nt2.68□□□□□ -1.98
SUB1P54000 MNE1YOR350C 1992 nt2.67□□□□□ -1.98
SUB1P54000 CDC50YCR094W 1176 nt2.67□□□□□ -1.98
SUB1P54000 YGR228WYGR228W 345 nt2.67□□□□□ -1.98
SUB1P54000 NOP10YHR072W-A 177 nt2.67□□□□□ -1.98
SUB1P54000 CSM4YPL200W 471 nt2.67□□□□□ -1.98
SUB1P54000 MUD1YBR119W 897 nt2.67□□□□□ -1.98
SUB1P54000 COS111YBR203W 2775 nt2.67□□□□□ -1.98
SUB1P54000 SAC3YDR159W 3906 nt2.67□□□□□ -1.98
SUB1P54000 VPS8YAL002W 3825 nt2.66□□□□□ -1.98
SUB1P54000 ARP8YOR141C 2646 nt2.66□□□□□ -1.98
SUB1P54000 SUP56tL(CAA)A 82 nt2.66□□□□□ -1.98
SUB1P54000 SUP53tL(CAA)C 82 nt2.66□□□□□ -1.98
SUB1P54000 tL(CAA)DtL(CAA)D 82 nt2.66□□□□□ -1.98
SUB1P54000 tL(CAA)G1tL(CAA)G1 82 nt2.66□□□□□ -1.98
SUB1P54000 SUP54tL(CAA)G2 82 nt2.66□□□□□ -1.98
SUB1P54000 tL(CAA)G3tL(CAA)G3 82 nt2.66□□□□□ -1.98
SUB1P54000 tL(CAA)KtL(CAA)K 82 nt2.66□□□□□ -1.98
SUB1P54000 tL(CAA)LtL(CAA)L 82 nt2.66□□□□□ -1.98
SUB1P54000 tL(CAA)MtL(CAA)M 82 nt2.66□□□□□ -1.98
SUB1P54000 tL(CAA)NtL(CAA)N 82 nt2.66□□□□□ -1.98
SUB1P54000 EMC6YLL014W 327 nt2.66□□□□□ -1.98
SUB1P54000 CMS1YLR003C 876 nt2.66□□□□□ -1.98
SUB1P54000 ARV1YLR242C 966 nt2.66□□□□□ -1.98
SUB1P54000 YOR105WYOR105W 327 nt2.66□□□□□ -1.98
SUB1P54000 YPL080CYPL080C 327 nt2.66□□□□□ -1.98
SUB1P54000 SPE1YKL184W 1401 nt2.66□□□□□ -1.98
SUB1P54000 RRI2YOL117W 1938 nt2.66□□□□□ -1.98
SUB1P54000 PAU10YDR542W 363 nt2.65□□□□□ -1.99
SUB1P54000 YER038W-AYER038W-A 381 nt2.65□□□□□ -1.99
SUB1P54000 PAU11YGL261C 363 nt2.65□□□□□ -1.99
SUB1P54000 SMD1YGR074W 441 nt2.65□□□□□ -1.99
SUB1P54000 LCL2YLR104W 396 nt2.65□□□□□ -1.99
SUB1P54000 PAU4YLR461W 363 nt2.65□□□□□ -1.99
SUB1P54000 YML037CYML037C 1023 nt2.65□□□□□ -1.99
SUB1P54000 DAD3YBR233W-A 285 nt2.65□□□□□ -1.99
SUB1P54000 YCL007CYCL007C 393 nt2.65□□□□□ -1.99
SUB1P54000 MGA2YIR033W 3342 nt2.65□□□□□ -1.99
SUB1P54000 IRA2YOL081W 9240 nt2.65□□□□□ -1.99
SUB1P54000 NAB6YML117W 3405 nt2.64□□□□□ -1.99
SUB1P54000 SNO3YFL060C 669 nt2.64□□□□□ -1.99
SUB1P54000 PRP21YJL203W 843 nt2.64□□□□□ -1.99
SUB1P54000 YHC1YLR298C 696 nt2.64□□□□□ -1.99
SUB1P54000 CCW14YLR390W-A 717 nt2.64□□□□□ -1.99
SUB1P54000 SNO2YNL334C 669 nt2.64□□□□□ -1.99
SUB1P54000 DPB11YJL090C 2295 nt2.64□□□□□ -1.99
SUB1P54000 INO80YGL150C 4470 nt2.64□□□□□ -1.99
SUB1P54000 MLH1YMR167W 2310 nt2.64□□□□□ -1.99
SUB1P54000 STH1YIL126W 4080 nt2.64□□□□□ -1.99
SUB1P54000 GRR1YJR090C 3456 nt2.63□□□□□ -1.99
SUB1P54000 VPS64YDR200C 1815 nt2.63□□□□□ -1.99
SUB1P54000 SPO22YIL073C 2928 nt2.63□□□□□ -1.99
SUB1P54000 VPS13YLL040C 9435 nt2.63□□□□□ -1.99
SUB1P54000 RNR4YGR180C 1038 nt2.63□□□□□ -1.99
SUB1P54000 YJR087WYJR087W 351 nt2.63□□□□□ -1.99
SUB1P54000 YLR053CYLR053C 327 nt2.63□□□□□ -1.99
SUB1P54000 YBL029C-AYBL029C-A 285 nt2.63□□□□□ -1.99
SUB1P54000 PDR8YLR266C 2106 nt2.62□□□□□ -1.99
SUB1P54000 YDR286CYDR286C 345 nt2.62□□□□□ -1.99
SUB1P54000 BET4YJL031C 984 nt2.62□□□□□ -1.99
SUB1P54000 YKR075W-AYKR075W-A 270 nt2.62□□□□□ -1.99
SUB1P54000 GRX8YLR364W 330 nt2.62□□□□□ -1.99
SUB1P54000 PDR1YGL013C 3207 nt2.62□□□□□ -1.99
SUB1P54000 BFA1YJR053W 1725 nt2.62□□□□□ -1.99
SUB1P54000 KAP123YER110C 3342 nt2.62□□□□□ -1.99
SUB1P54000 HAA1YPR008W 2085 nt2.61□□□□□ -1.99
SUB1P54000 SPC72YAL047C 1869 nt2.61□□□□□ -1.99
SUB1P54000 YDR018CYDR018C 1191 nt2.61□□□□□ -1.99
SUB1P54000 YFR009W-AYFR009W-A 258 nt2.61□□□□□ -1.99
SUB1P54000 YMR013C-AYMR013C-A 150 nt2.61□□□□□ -1.99
SUB1P54000 ICY1YMR195W 384 nt2.61□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 44.5 ms