Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 MGA2YIR033W 3342 nt1.84□□□□□ -2.11
SSU72P53538 REF2YDR195W 1602 nt1.84□□□□□ -2.11
SSU72P53538 CFT2YLR115W 2580 nt1.84□□□□□ -2.11
SSU72P53538 KAR9YPL269W 1935 nt1.84□□□□□ -2.11
SSU72P53538 SAP190YKR028W 3102 nt1.84□□□□□ -2.11
SSU72P53538 COX13YGL191W 390 nt1.84□□□□□ -2.11
SSU72P53538 YGR109W-AYGR109W-A 873 nt1.84□□□□□ -2.11
SSU72P53538 YIL082WYIL082W 873 nt1.84□□□□□ -2.11
SSU72P53538 YJL086CYJL086C 369 nt1.84□□□□□ -2.11
SSU72P53538 YNL235CYNL235C 432 nt1.84□□□□□ -2.11
SSU72P53538 YOL085W-AYOL085W-A 213 nt1.84□□□□□ -2.11
SSU72P53538 YOR283WYOR283W 693 nt1.84□□□□□ -2.11
SSU72P53538 RTT101YJL047C 2529 nt1.84□□□□□ -2.12
SSU72P53538 SIP3YNL257C 3690 nt1.84□□□□□ -2.12
SSU72P53538 BFR1YOR198C 1413 nt1.83□□□□□ -2.12
SSU72P53538 FKS1YLR342W 5631 nt1.83□□□□□ -2.12
SSU72P53538 KOG1YHR186C 4674 nt1.83□□□□□ -2.12
SSU72P53538 RTT107YHR154W 3213 nt1.83□□□□□ -2.12
SSU72P53538 YDR042CYDR042C 603 nt1.83□□□□□ -2.12
SSU72P53538 GPI19YDR437W 423 nt1.83□□□□□ -2.12
SSU72P53538 IRC4YDR540C 540 nt1.83□□□□□ -2.12
SSU72P53538 PRE1YER012W 597 nt1.83□□□□□ -2.12
SSU72P53538 AIM18YHR198C 966 nt1.83□□□□□ -2.12
SSU72P53538 YKL123WYKL123W 381 nt1.83□□□□□ -2.12
SSU72P53538 GIM3YNL153C 390 nt1.83□□□□□ -2.12
SSU72P53538 YOR152CYOR152C 771 nt1.83□□□□□ -2.12
SSU72P53538 SRL4YPL033C 846 nt1.83□□□□□ -2.12
SSU72P53538 YNL144CYNL144C 2223 nt1.83□□□□□ -2.12
SSU72P53538 MFB1YDR219C 1398 nt1.83□□□□□ -2.12
SSU72P53538 CTF13YMR094W 1437 nt1.83□□□□□ -2.12
SSU72P53538 DNF1YER166W 4716 nt1.82□□□□□ -2.12
SSU72P53538 RPN3YER021W 1572 nt1.82□□□□□ -2.12
SSU72P53538 MES1YGR264C 2256 nt1.82□□□□□ -2.12
SSU72P53538 GPI17YDR434W 1605 nt1.82□□□□□ -2.12
SSU72P53538 snR5snR5 204 nt1.82□□□□□ -2.12
SSU72P53538 YDL163WYDL163W 303 nt1.82□□□□□ -2.12
SSU72P53538 TDA2YER071C 381 nt1.82□□□□□ -2.12
SSU72P53538 SNO3YFL060C 669 nt1.82□□□□□ -2.12
SSU72P53538 YJL052C-AYJL052C-A 120 nt1.82□□□□□ -2.12
SSU72P53538 SRP21YKL122C 504 nt1.82□□□□□ -2.12
SSU72P53538 ECM9YKR004C 1134 nt1.82□□□□□ -2.12
SSU72P53538 YMR173W-AYMR173W-A 1185 nt1.82□□□□□ -2.12
SSU72P53538 SNO2YNL334C 669 nt1.82□□□□□ -2.12
SSU72P53538 YNR034W-AYNR034W-A 297 nt1.82□□□□□ -2.12
SSU72P53538 YOL029CYOL029C 606 nt1.82□□□□□ -2.12
SSU72P53538 YPR170CYPR170C 336 nt1.82□□□□□ -2.12
SSU72P53538 TRZ1YKR079C 2517 nt1.82□□□□□ -2.12
SSU72P53538 VPS41YDR080W 2979 nt1.82□□□□□ -2.12
SSU72P53538 UBP2YOR124C 3819 nt1.82□□□□□ -2.12
SSU72P53538 NCS2YNL119W 1482 nt1.82□□□□□ -2.12
SSU72P53538 YHR214C-BYHR214C-B 5382 nt1.81□□□□□ -2.12
SSU72P53538 BRE1YDL074C 2103 nt1.81□□□□□ -2.12
SSU72P53538 YDR115WYDR115W 318 nt1.81□□□□□ -2.12
SSU72P53538 CKA1YIL035C 1119 nt1.81□□□□□ -2.12
SSU72P53538 PRP21YJL203W 843 nt1.81□□□□□ -2.12
SSU72P53538 YMR045CYMR045C 5268 nt1.81□□□□□ -2.12
SSU72P53538 VTC3YPL019C 2508 nt1.81□□□□□ -2.12
SSU72P53538 TFC3YAL001C 3483 nt1.81□□□□□ -2.12
SSU72P53538 APL5YPL195W 2799 nt1.8□□□□□ -2.12
SSU72P53538 SLN1YIL147C 3663 nt1.8□□□□□ -2.12
SSU72P53538 snR9snR9 187 nt1.8□□□□□ -2.12
SSU72P53538 YDR461C-AYDR461C-A 243 nt1.8□□□□□ -2.12
SSU72P53538 RPS26BYER131W 360 nt1.8□□□□□ -2.12
SSU72P53538 YHR210CYHR210C 1026 nt1.8□□□□□ -2.12
SSU72P53538 PAU14YIL176C 363 nt1.8□□□□□ -2.12
SSU72P53538 PAU1YJL223C 363 nt1.8□□□□□ -2.12
SSU72P53538 snR189snR189 189 nt1.8□□□□□ -2.12
SSU72P53538 YPR145C-AYPR145C-A 237 nt1.8□□□□□ -2.12
SSU72P53538 VPS16YPL045W 2397 nt1.79□□□□□ -2.12
SSU72P53538 snR59snR59 78 nt1.79□□□□□ -2.12
SSU72P53538 TIF35YDR429C 825 nt1.79□□□□□ -2.12
SSU72P53538 FAR7YFR008W 666 nt1.79□□□□□ -2.12
SSU72P53538 PRP38YGR075C 729 nt1.79□□□□□ -2.12
SSU72P53538 YHR054CYHR054C 1065 nt1.79□□□□□ -2.12
SSU72P53538 YAP5YIR018W 738 nt1.79□□□□□ -2.12
SSU72P53538 YOR169CYOR169C 465 nt1.79□□□□□ -2.12
SSU72P53538 NPR1YNL183C 2373 nt1.79□□□□□ -2.12
SSU72P53538 SHE4YOR035C 2370 nt1.78□□□□□ -2.12
SSU72P53538 DAL5YJR152W 1632 nt1.78□□□□□ -2.12
SSU72P53538 ADK1YDR226W 669 nt1.78□□□□□ -2.12
SSU72P53538 TMA20YER007C-A 546 nt1.78□□□□□ -2.12
SSU72P53538 YFL012W-AYFL012W-A 375 nt1.78□□□□□ -2.12
SSU72P53538 YGR242WYGR242W 309 nt1.78□□□□□ -2.12
SSU72P53538 ACF4YJR083C 930 nt1.78□□□□□ -2.12
SSU72P53538 PDP3YLR455W 915 nt1.78□□□□□ -2.12
SSU72P53538 YMR254CYMR254C 309 nt1.78□□□□□ -2.12
SSU72P53538 YNL150WYNL150W 408 nt1.78□□□□□ -2.12
SSU72P53538 MIX23YBL107C 591 nt1.78□□□□□ -2.12
SSU72P53538 PEP12YOR036W 867 nt1.78□□□□□ -2.12
SSU72P53538 CSM4YPL200W 471 nt1.78□□□□□ -2.12
SSU72P53538 DIS3YOL021C 3006 nt1.78□□□□□ -2.12
SSU72P53538 PRP6YBR055C 2700 nt1.78□□□□□ -2.12
SSU72P53538 YPR089WYPR089W 2667 nt1.78□□□□□ -2.12
SSU72P53538 UTP22YGR090W 3714 nt1.78□□□□□ -2.13
SSU72P53538 VPH1YOR270C 2523 nt1.77□□□□□ -2.13
SSU72P53538 YDR018CYDR018C 1191 nt1.77□□□□□ -2.13
SSU72P53538 NCB2YDR397C 441 nt1.77□□□□□ -2.13
SSU72P53538 GLC7YER133W 939 nt1.77□□□□□ -2.13
SSU72P53538 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
SSU72P53538 SDL1YIL167W 633 nt1.77□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 65.8 ms