Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 TAO3YIL129C 7131 nt3.14□□□□□ -1.91
RFX1P48743 ENA2YDR039C 3276 nt3.13□□□□□ -1.91
RFX1P48743 ENA1YDR040C 3276 nt3.13□□□□□ -1.91
RFX1P48743 YKL100CYKL100C 1764 nt3.13□□□□□ -1.91
RFX1P48743 BNI4YNL233W 2679 nt3.13□□□□□ -1.91
RFX1P48743 YDL068WYDL068W 330 nt3.13□□□□□ -1.91
RFX1P48743 ATP17YDR377W 306 nt3.13□□□□□ -1.91
RFX1P48743 TWF1YGR080W 999 nt3.13□□□□□ -1.91
RFX1P48743 YHR052W-AYHR052W-A 195 nt3.13□□□□□ -1.91
RFX1P48743 YHR054W-AYHR054W-A 195 nt3.13□□□□□ -1.91
RFX1P48743 YIL012WYIL012W 342 nt3.13□□□□□ -1.91
RFX1P48743 PAU23YLR037C 375 nt3.13□□□□□ -1.91
RFX1P48743 SNQ2YDR011W 4506 nt3.13□□□□□ -1.91
RFX1P48743 MSH2YOL090W 2895 nt3.13□□□□□ -1.91
RFX1P48743 MED1YPR070W 1701 nt3.13□□□□□ -1.91
RFX1P48743 DIE2YGR227W 1578 nt3.12□□□□□ -1.91
RFX1P48743 MKT1YNL085W 2493 nt3.12□□□□□ -1.91
RFX1P48743 DPB11YJL090C 2295 nt3.12□□□□□ -1.91
RFX1P48743 MDM32YOR147W 1869 nt3.12□□□□□ -1.91
RFX1P48743 IRC4YDR540C 540 nt3.12□□□□□ -1.91
RFX1P48743 MAM33YIL070C 801 nt3.12□□□□□ -1.91
RFX1P48743 YJR023CYJR023C 402 nt3.12□□□□□ -1.91
RFX1P48743 JIP3YLR331C 378 nt3.12□□□□□ -1.91
RFX1P48743 VHR2YER064C 1518 nt3.12□□□□□ -1.91
RFX1P48743 RRM3YHR031C 2172 nt3.11□□□□□ -1.91
RFX1P48743 CDH1YGL003C 1701 nt3.11□□□□□ -1.91
RFX1P48743 NOP19YGR251W 591 nt3.11□□□□□ -1.91
RFX1P48743 RPS21BYJL136C 264 nt3.11□□□□□ -1.91
RFX1P48743 MRPL31YKL138C 396 nt3.11□□□□□ -1.91
RFX1P48743 YOR146WYOR146W 306 nt3.11□□□□□ -1.91
RFX1P48743 RPL20BYOR312C 519 nt3.11□□□□□ -1.91
RFX1P48743 ISU1YPL135W 498 nt3.11□□□□□ -1.91
RFX1P48743 TRZ1YKR079C 2517 nt3.1□□□□□ -1.91
RFX1P48743 tF(GAA)DtF(GAA)D 73 nt3.1□□□□□ -1.91
RFX1P48743 DYN2YDR424C 279 nt3.1□□□□□ -1.91
RFX1P48743 tF(GAA)NtF(GAA)N 73 nt3.1□□□□□ -1.91
RFX1P48743 YEL018C-AYEL018C-A 534 nt3.1□□□□□ -1.91
RFX1P48743 RPS23AYGR118W 438 nt3.1□□□□□ -1.91
RFX1P48743 YJR140W-AYJR140W-A 150 nt3.1□□□□□ -1.91
RFX1P48743 YMR031W-AYMR031W-A 327 nt3.1□□□□□ -1.91
RFX1P48743 URA10YMR271C 684 nt3.1□□□□□ -1.91
RFX1P48743 YPL276WYPL276W 438 nt3.1□□□□□ -1.91
RFX1P48743 CCT7YJL111W 1653 nt3.1□□□□□ -1.91
RFX1P48743 SNF12YNR023W 1701 nt3.1□□□□□ -1.91
RFX1P48743 MYO5YMR109W 3660 nt3.09□□□□□ -1.91
RFX1P48743 BIT61YJL058C 1632 nt3.09□□□□□ -1.91
RFX1P48743 NMD2YHR077C 3270 nt3.09□□□□□ -1.91
RFX1P48743 SDC1YDR469W 528 nt3.09□□□□□ -1.91
RFX1P48743 YER076W-AYER076W-A 348 nt3.09□□□□□ -1.91
RFX1P48743 YIR040CYIR040C 333 nt3.09□□□□□ -1.91
RFX1P48743 YKL111CYKL111C 336 nt3.09□□□□□ -1.91
RFX1P48743 VTI1YMR197C 654 nt3.09□□□□□ -1.91
RFX1P48743 NDT80YHR124W 1884 nt3.09□□□□□ -1.92
RFX1P48743 EPL1YFL024C 2499 nt3.09□□□□□ -1.92
RFX1P48743 RGC1YPR115W 3252 nt3.08□□□□□ -1.92
RFX1P48743 UBP14YBR058C 2346 nt3.08□□□□□ -1.92
RFX1P48743 YSW1YBR148W 1830 nt3.08□□□□□ -1.92
RFX1P48743 BUD4YJR092W 4344 nt3.08□□□□□ -1.92
RFX1P48743 TSA2YDR453C 591 nt3.08□□□□□ -1.92
RFX1P48743 YHL037CYHL037C 402 nt3.08□□□□□ -1.92
RFX1P48743 RPC10YHR143W-A 213 nt3.08□□□□□ -1.92
RFX1P48743 YKL083WYKL083W 615 nt3.08□□□□□ -1.92
RFX1P48743 RPS28BYLR264W 204 nt3.08□□□□□ -1.92
RFX1P48743 RPS7BYNL096C 573 nt3.08□□□□□ -1.92
RFX1P48743 YOR231C-AYOR231C-A 201 nt3.08□□□□□ -1.92
RFX1P48743 YJR003CYJR003C 1560 nt3.08□□□□□ -1.92
RFX1P48743 TFB1YDR311W 1929 nt3.07□□□□□ -1.92
RFX1P48743 GIS4YML006C 2325 nt3.07□□□□□ -1.92
RFX1P48743 YCR022CYCR022C 345 nt3.07□□□□□ -1.92
RFX1P48743 YDL152WYDL152W 366 nt3.07□□□□□ -1.92
RFX1P48743 YER066C-AYER066C-A 501 nt3.07□□□□□ -1.92
RFX1P48743 YHR139C-AYHR139C-A 312 nt3.07□□□□□ -1.92
RFX1P48743 PET191YJR034W 327 nt3.07□□□□□ -1.92
RFX1P48743 YOL019W-AYOL019W-A 153 nt3.07□□□□□ -1.92
RFX1P48743 HEH2YDR458C 1992 nt3.07□□□□□ -1.92
RFX1P48743 IOC3YFR013W 2364 nt3.07□□□□□ -1.92
RFX1P48743 VPS3YDR495C 3036 nt3.06□□□□□ -1.92
RFX1P48743 SPC72YAL047C 1869 nt3.06□□□□□ -1.92
RFX1P48743 GCD10YNL062C 1437 nt3.06□□□□□ -1.92
RFX1P48743 RPA190YOR341W 4995 nt3.06□□□□□ -1.92
RFX1P48743 TIM12YBR091C 330 nt3.06□□□□□ -1.92
RFX1P48743 PDC2YDR081C 2778 nt3.05□□□□□ -1.92
RFX1P48743 YER188C-AYER188C-A 300 nt3.05□□□□□ -1.92
RFX1P48743 YHL005CYHL005C 393 nt3.05□□□□□ -1.92
RFX1P48743 YIL054WYIL054W 318 nt3.05□□□□□ -1.92
RFX1P48743 NSL1YPL233W 651 nt3.05□□□□□ -1.92
RFX1P48743 YDR034C-DYDR034C-D 5313 nt3.05□□□□□ -1.92
RFX1P48743 MDV1YJL112W 2145 nt3.05□□□□□ -1.92
RFX1P48743 TCP1YDR212W 1680 nt3.04□□□□□ -1.92
RFX1P48743 SPO14YKR031C 5052 nt3.04□□□□□ -1.92
RFX1P48743 TLC1TLC1 1301 nt3.04□□□□□ -1.92
RFX1P48743 snR191snR191 274 nt3.04□□□□□ -1.92
RFX1P48743 SWD3YBR175W 948 nt3.04□□□□□ -1.92
RFX1P48743 ENA5YDR038C 3276 nt3.03□□□□□ -1.92
RFX1P48743 ATG13YPR185W 2217 nt3.03□□□□□ -1.92
RFX1P48743 YME2YMR302C 2553 nt3.03□□□□□ -1.92
RFX1P48743 APC11YDL008W 498 nt3.03□□□□□ -1.92
RFX1P48743 APC9YLR102C 798 nt3.03□□□□□ -1.92
RFX1P48743 GCD6YDR211W 2139 nt3.02□□□□□ -1.93
RFX1P48743 NHP2YDL208W 471 nt3.02□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 163.3 ms