Protein–RNA interactions for Protein: P38961

RRP8, 25S rRNA (adenine(645)-N(1))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP8P38961 YHR138CYHR138C 345 nt3.18□□□□□ -1.9
RRP8P38961 TPM2YIL138C 486 nt3.18□□□□□ -1.9
RRP8P38961 YKL063CYKL063C 504 nt3.18□□□□□ -1.9
RRP8P38961 YKL068W-AYKL068W-A 237 nt3.18□□□□□ -1.9
RRP8P38961 YLR230WYLR230W 306 nt3.18□□□□□ -1.9
RRP8P38961 YMR001C-AYMR001C-A 231 nt3.18□□□□□ -1.9
RRP8P38961 RIO2YNL207W 1278 nt3.18□□□□□ -1.9
RRP8P38961 YPL034WYPL034W 498 nt3.18□□□□□ -1.9
RRP8P38961 PSY2YNL201C 2577 nt3.18□□□□□ -1.9
RRP8P38961 SPE1YKL184W 1401 nt3.18□□□□□ -1.9
RRP8P38961 APC2YLR127C 2562 nt3.17□□□□□ -1.9
RRP8P38961 RAX2YLR084C 3663 nt3.17□□□□□ -1.9
RRP8P38961 RTR2YDR066C 591 nt3.17□□□□□ -1.9
RRP8P38961 YLR101CYLR101C 396 nt3.17□□□□□ -1.9
RRP8P38961 HHT2YNL031C 411 nt3.17□□□□□ -1.9
RRP8P38961 PEP12YOR036W 867 nt3.17□□□□□ -1.9
RRP8P38961 RRD2YPL152W 1077 nt3.17□□□□□ -1.9
RRP8P38961 YPL276WYPL276W 438 nt3.17□□□□□ -1.9
RRP8P38961 YKR078WYKR078W 1758 nt3.17□□□□□ -1.9
RRP8P38961 RGR1YLR071C 3249 nt3.17□□□□□ -1.9
RRP8P38961 LEU3YLR451W 2661 nt3.16□□□□□ -1.9
RRP8P38961 IES5YER092W 378 nt3.16□□□□□ -1.9
RRP8P38961 ERV1YGR029W 570 nt3.16□□□□□ -1.9
RRP8P38961 ECL1YGR146C 636 nt3.16□□□□□ -1.9
RRP8P38961 CRG1YHR209W 876 nt3.16□□□□□ -1.9
RRP8P38961 YLR302CYLR302C 363 nt3.16□□□□□ -1.9
RRP8P38961 YML108WYML108W 318 nt3.16□□□□□ -1.9
RRP8P38961 ARR2YPR200C 393 nt3.16□□□□□ -1.9
RRP8P38961 RLF2YPR018W 1821 nt3.15□□□□□ -1.91
RRP8P38961 YCR081C-AYCR081C-A 237 nt3.15□□□□□ -1.91
RRP8P38961 snR70snR70 164 nt3.15□□□□□ -1.91
RRP8P38961 YER135CYER135C 393 nt3.15□□□□□ -1.91
RRP8P38961 YNL146C-AYNL146C-A 195 nt3.15□□□□□ -1.91
RRP8P38961 YNL179CYNL179C 438 nt3.15□□□□□ -1.91
RRP8P38961 ESF2YNR054C 951 nt3.15□□□□□ -1.91
RRP8P38961 YOL159CYOL159C 516 nt3.15□□□□□ -1.91
RRP8P38961 ATG31YDR022C 591 nt3.14□□□□□ -1.91
RRP8P38961 TIM11YDR322C-A 291 nt3.14□□□□□ -1.91
RRP8P38961 RRT13YER066W 558 nt3.14□□□□□ -1.91
RRP8P38961 YMR31YFR049W 372 nt3.14□□□□□ -1.91
RRP8P38961 JIP3YLR331C 378 nt3.14□□□□□ -1.91
RRP8P38961 BAS1YKR099W 2436 nt3.14□□□□□ -1.91
RRP8P38961 PES4YFR023W 1836 nt3.14□□□□□ -1.91
RRP8P38961 YPL150WYPL150W 2706 nt3.13□□□□□ -1.91
RRP8P38961 YDR250CYDR250C 276 nt3.13□□□□□ -1.91
RRP8P38961 TIF35YDR429C 825 nt3.13□□□□□ -1.91
RRP8P38961 PKR1YMR123W 369 nt3.13□□□□□ -1.91
RRP8P38961 YBR076C-AYBR076C-A 267 nt3.13□□□□□ -1.91
RRP8P38961 DBP7YKR024C 2229 nt3.13□□□□□ -1.91
RRP8P38961 YBR012W-AYBR012W-A 1323 nt3.13□□□□□ -1.91
RRP8P38961 YOR142W-AYOR142W-A 1323 nt3.13□□□□□ -1.91
RRP8P38961 YPR158W-AYPR158W-A 1323 nt3.13□□□□□ -1.91
RRP8P38961 UBP14YBR058C 2346 nt3.13□□□□□ -1.91
RRP8P38961 SRC1YML034W 2505 nt3.13□□□□□ -1.91
RRP8P38961 YER189WYER189W 369 nt3.12□□□□□ -1.91
RRP8P38961 YHL046W-AYHL046W-A 327 nt3.12□□□□□ -1.91
RRP8P38961 BIG1YHR101C 1008 nt3.12□□□□□ -1.91
RRP8P38961 tW(CCA)G1tW(CCA)G1 72 nt3.12□□□□□ -1.91
RRP8P38961 tW(CCA)G2tW(CCA)G2 72 nt3.12□□□□□ -1.91
RRP8P38961 tW(CCA)JtW(CCA)J 72 nt3.12□□□□□ -1.91
RRP8P38961 tW(CCA)KtW(CCA)K 72 nt3.12□□□□□ -1.91
RRP8P38961 tW(CCA)MtW(CCA)M 72 nt3.12□□□□□ -1.91
RRP8P38961 tW(CCA)PtW(CCA)P 72 nt3.12□□□□□ -1.91
RRP8P38961 HSP10YOR020C 321 nt3.12□□□□□ -1.91
RRP8P38961 YBR209WYBR209W 318 nt3.12□□□□□ -1.91
RRP8P38961 snR54snR54 86 nt3.12□□□□□ -1.91
RRP8P38961 SNF12YNR023W 1701 nt3.12□□□□□ -1.91
RRP8P38961 YBL005W-BYBL005W-B 5268 nt3.12□□□□□ -1.91
RRP8P38961 CYR1YJL005W 6081 nt3.11□□□□□ -1.91
RRP8P38961 NAB3YPL190C 2409 nt3.11□□□□□ -1.91
RRP8P38961 RPS17BYDR447C 411 nt3.11□□□□□ -1.91
RRP8P38961 RAD6YGL058W 519 nt3.11□□□□□ -1.91
RRP8P38961 PAU23YLR037C 375 nt3.11□□□□□ -1.91
RRP8P38961 ARV1YLR242C 966 nt3.11□□□□□ -1.91
RRP8P38961 YLR269CYLR269C 351 nt3.11□□□□□ -1.91
RRP8P38961 YPP1YGR198W 2454 nt3.11□□□□□ -1.91
RRP8P38961 PPN1YDR452W 2025 nt3.1□□□□□ -1.91
RRP8P38961 RUD3YOR216C 1455 nt3.1□□□□□ -1.91
RRP8P38961 FKS3YMR306W 5358 nt3.1□□□□□ -1.91
RRP8P38961 YPL216WYPL216W 3309 nt3.1□□□□□ -1.91
RRP8P38961 DYN2YDR424C 279 nt3.1□□□□□ -1.91
RRP8P38961 HPA3YEL066W 540 nt3.1□□□□□ -1.91
RRP8P38961 RTR1YER139C 681 nt3.1□□□□□ -1.91
RRP8P38961 RTS3YGR161C 792 nt3.1□□□□□ -1.91
RRP8P38961 SPC1YJR010C-A 285 nt3.1□□□□□ -1.91
RRP8P38961 YAR047CYAR047C 321 nt3.1□□□□□ -1.91
RRP8P38961 LSM2YBL026W 288 nt3.1□□□□□ -1.91
RRP8P38961 CDC33YOL139C 642 nt3.1□□□□□ -1.91
RRP8P38961 NSL1YPL233W 651 nt3.1□□□□□ -1.91
RRP8P38961 DUG2YBR281C 2637 nt3.1□□□□□ -1.91
RRP8P38961 YGR067CYGR067C 2415 nt3.1□□□□□ -1.91
RRP8P38961 SWF1YDR126W 1011 nt3.09□□□□□ -1.91
RRP8P38961 RPL29YFR032C-A 180 nt3.09□□□□□ -1.91
RRP8P38961 YBR012CYBR012C 420 nt3.09□□□□□ -1.91
RRP8P38961 YOR248WYOR248W 303 nt3.09□□□□□ -1.91
RRP8P38961 YPL039WYPL039W 951 nt3.09□□□□□ -1.91
RRP8P38961 YPL080CYPL080C 327 nt3.09□□□□□ -1.91
RRP8P38961 ISU1YPL135W 498 nt3.09□□□□□ -1.91
RRP8P38961 MSB2YGR014W 3921 nt3.09□□□□□ -1.91
RRP8P38961 ATG13YPR185W 2217 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 66.8 ms