Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.01■□□□□ 0.95
PABPC1P11940 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PABPC1P11940 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21■□□□□ 0.95
PABPC1P11940 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21■□□□□ 0.95
PABPC1P11940 NME6-213ENST00000451657 871 ntTSL 2 BASIC21■□□□□ 0.95
PABPC1P11940 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PABPC1P11940 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21■□□□□ 0.95
PABPC1P11940 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PABPC1P11940 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21■□□□□ 0.95
PABPC1P11940 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21■□□□□ 0.95
PABPC1P11940 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC1P11940 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.99■□□□□ 0.95
PABPC1P11940 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PABPC1P11940 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PABPC1P11940 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.99■□□□□ 0.95
PABPC1P11940 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.99■□□□□ 0.95
PABPC1P11940 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.99■□□□□ 0.95
PABPC1P11940 POU5F1P3-201ENST00000428824 1078 ntBASIC20.99■□□□□ 0.95
PABPC1P11940 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PABPC1P11940 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.99■□□□□ 0.95
PABPC1P11940 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.99■□□□□ 0.95
PABPC1P11940 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.99■□□□□ 0.95
PABPC1P11940 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.99■□□□□ 0.95
PABPC1P11940 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC1P11940 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC1P11940 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC1P11940 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PABPC1P11940 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC1P11940 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC1P11940 AC105020.6-201ENST00000621523 1217 ntBASIC20.98■□□□□ 0.95
PABPC1P11940 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PABPC1P11940 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC1P11940 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.98■□□□□ 0.95
PABPC1P11940 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC1P11940 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC1P11940 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PABPC1P11940 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.97■□□□□ 0.95
PABPC1P11940 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.97■□□□□ 0.95
PABPC1P11940 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.97■□□□□ 0.95
PABPC1P11940 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.97■□□□□ 0.95
PABPC1P11940 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.97■□□□□ 0.95
PABPC1P11940 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC1P11940 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PABPC1P11940 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.96■□□□□ 0.95
PABPC1P11940 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.96■□□□□ 0.95
PABPC1P11940 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC1P11940 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC1P11940 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC1P11940 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.96■□□□□ 0.95
PABPC1P11940 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.96■□□□□ 0.95
PABPC1P11940 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.96■□□□□ 0.95
PABPC1P11940 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.96■□□□□ 0.95
PABPC1P11940 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC1P11940 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC1P11940 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.96■□□□□ 0.95
PABPC1P11940 AC087633.2-202ENST00000565166 1439 ntBASIC20.95■□□□□ 0.95
PABPC1P11940 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PABPC1P11940 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC1P11940 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PABPC1P11940 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC1P11940 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC1P11940 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC1P11940 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PABPC1P11940 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.95■□□□□ 0.94
PABPC1P11940 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC1P11940 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms