Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 YBL094CYBL094C 333 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 GAL7YBR018C 1101 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 POL4YCR014C 1749 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 PLM2YDR501W 1566 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 FMN1YDR236C 657 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 SDC1YDR469W 528 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 YFL041W-AYFL041W-A 192 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 YML009C-AYML009C-A 327 nt1.05□□□□□ -2.24
TY4B-HP0C2J7 RAD9YDR217C 3930 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 DSS1YMR287C 2910 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 UBC13YDR092W 462 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 MRPL24YMR193W 777 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 TYE7YOR344C 876 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 YOR019WYOR019W 2193 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 IRC3YDR332W 2070 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 VPS9YML097C 1356 nt1.04□□□□□ -2.24
TY4B-HP0C2J7 AIM36YMR157C 768 nt1.03□□□□□ -2.24
TY4B-HP0C2J7 YIL089WYIL089W 618 nt1.03□□□□□ -2.25
TY4B-HP0C2J7 CCL1YPR025C 1182 nt1.03□□□□□ -2.25
TY4B-HP0C2J7 MSS2YDL107W 1056 nt1.02□□□□□ -2.25
TY4B-HP0C2J7 WIP1YDR374W-A 270 nt1.02□□□□□ -2.25
TY4B-HP0C2J7 CTL1YMR180C 963 nt1.02□□□□□ -2.25
TY4B-HP0C2J7 YNL284C-AYNL284C-A 1323 nt1.02□□□□□ -2.25
TY4B-HP0C2J7 YBR012W-AYBR012W-A 1323 nt1.02□□□□□ -2.25
TY4B-HP0C2J7 YOR142W-AYOR142W-A 1323 nt1.02□□□□□ -2.25
TY4B-HP0C2J7 YPR158W-AYPR158W-A 1323 nt1.02□□□□□ -2.25
TY4B-HP0C2J7 CDC36YDL165W 576 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 DPP1YDR284C 870 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 YFR010W-AYFR010W-A 189 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 TAN1YGL232W 870 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 RGI2YIL057C 495 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 YIL161WYIL161W 708 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 AIM41YOR215C 558 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 TIM18YOR297C 579 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 APC2YLR127C 2562 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 TFB1YDR311W 1929 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 ARI1YGL157W 1044 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 YLR053CYLR053C 327 nt1.01□□□□□ -2.25
TY4B-HP0C2J7 APC5YOR249C 2058 nt1□□□□□ -2.25
TY4B-HP0C2J7 NRG1YDR043C 696 nt1□□□□□ -2.25
TY4B-HP0C2J7 SHU2YDR078C 672 nt1□□□□□ -2.25
TY4B-HP0C2J7 YDR521WYDR521W 336 nt1□□□□□ -2.25
TY4B-HP0C2J7 YMR31YFR049W 372 nt1□□□□□ -2.25
TY4B-HP0C2J7 SRN2YLR119W 642 nt1□□□□□ -2.25
TY4B-HP0C2J7 YNL234WYNL234W 1281 nt1□□□□□ -2.25
TY4B-HP0C2J7 RPS26BYER131W 360 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 GLC7YER133W 939 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 CMC4YMR194C-B 222 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 YOR218CYOR218C 420 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 LTP1YPR073C 486 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 CAT2YML042W 2013 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 YDL186WYDL186W 834 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 YMR099CYMR099C 894 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 OST2YOR103C 393 nt0.99□□□□□ -2.25
TY4B-HP0C2J7 TBS1YBR150C 3285 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 YHL012WYHL012W 1482 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 SSP1YHR184W 1716 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 APL1YJR005W 2103 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 CET1YPL228W 1650 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 RTG3YBL103C 1461 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 HLR1YDR528W 1272 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 COBQ0105 1158 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 YPR146CYPR146C 330 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 PUF4YGL014W 2667 nt0.98□□□□□ -2.25
TY4B-HP0C2J7 RRP6YOR001W 2202 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 YGR109W-AYGR109W-A 873 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 YIL058WYIL058W 285 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 MCM22YJR135C 720 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 YLR379WYLR379W 375 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 PDS5YMR076C 3834 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 YMR144WYMR144W 1029 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 UAF30YOR295W 687 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 YRO2YBR054W 1035 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 SPO24YPR036W-A 204 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 VID24YBR105C 1089 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 YBR201C-AYBR201C-A 204 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 UTP8YGR128C 2142 nt0.97□□□□□ -2.25
TY4B-HP0C2J7 BIT61YJL058C 1632 nt0.96□□□□□ -2.25
TY4B-HP0C2J7 PCL2YDL127W 927 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 YGR114CYGR114C 390 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 BRO1YPL084W 2535 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 DAL5YJR152W 1632 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)BtT(AGU)B 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)CtT(AGU)C 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)DtT(AGU)D 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)HtT(AGU)H 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)I1tT(AGU)I1 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)I2tT(AGU)I2 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)JtT(AGU)J 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)N1tT(AGU)N1 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)N2tT(AGU)N2 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)O1tT(AGU)O1 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 tT(AGU)O2tT(AGU)O2 73 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 SNC1YAL030W 354 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 RNP1YLL046C 750 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 MTG1YMR097C 1104 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 YOL014WYOL014W 375 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 YCL046WYCL046W 324 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 WHI3YNL197C 1986 nt0.96□□□□□ -2.26
TY4B-HP0C2J7 CDC37YDR168W 1521 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms