Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YIL058WYIL058W 285 nt1.34□□□□□ -2.2
TY1B-HO13535 TRL1YJL087C 2484 nt1.34□□□□□ -2.2
TY1B-HO13535 YDR320W-BYDR320W-B 138 nt1.33□□□□□ -2.2
TY1B-HO13535 YLR053CYLR053C 327 nt1.33□□□□□ -2.2
TY1B-HO13535 YOR019WYOR019W 2193 nt1.32□□□□□ -2.2
TY1B-HO13535 FMN1YDR236C 657 nt1.32□□□□□ -2.2
TY1B-HO13535 LRS4YDR439W 1044 nt1.32□□□□□ -2.2
TY1B-HO13535 YIL089WYIL089W 618 nt1.32□□□□□ -2.2
TY1B-HO13535 MRPL24YMR193W 777 nt1.32□□□□□ -2.2
TY1B-HO13535 AIM4YBR194W 372 nt1.32□□□□□ -2.2
TY1B-HO13535 YPR146CYPR146C 330 nt1.31□□□□□ -2.2
TY1B-HO13535 SYO1YDL063C 1863 nt1.31□□□□□ -2.2
TY1B-HO13535 RVS161YCR009C 798 nt1.31□□□□□ -2.2
TY1B-HO13535 WIP1YDR374W-A 270 nt1.31□□□□□ -2.2
TY1B-HO13535 YGR064WYGR064W 369 nt1.31□□□□□ -2.2
TY1B-HO13535 YGR283CYGR283C 1026 nt1.31□□□□□ -2.2
TY1B-HO13535 RPL34BYIL052C 366 nt1.31□□□□□ -2.2
TY1B-HO13535 YNR034W-AYNR034W-A 297 nt1.31□□□□□ -2.2
TY1B-HO13535 YSY6YBR162W-A 198 nt1.31□□□□□ -2.2
TY1B-HO13535 YNR066CYNR066C 1311 nt1.31□□□□□ -2.2
TY1B-HO13535 YMR144WYMR144W 1029 nt1.3□□□□□ -2.2
TY1B-HO13535 PMD1YER132C 5262 nt1.29□□□□□ -2.2
TY1B-HO13535 UBC13YDR092W 462 nt1.29□□□□□ -2.2
TY1B-HO13535 YLR400WYLR400W 474 nt1.29□□□□□ -2.2
TY1B-HO13535 CCL1YPR025C 1182 nt1.29□□□□□ -2.2
TY1B-HO13535 YHL012WYHL012W 1482 nt1.29□□□□□ -2.2
TY1B-HO13535 YOR203WYOR203W 354 nt1.29□□□□□ -2.2
TY1B-HO13535 POL4YCR014C 1749 nt1.28□□□□□ -2.2
TY1B-HO13535 YDR170W-AYDR170W-A 1323 nt1.28□□□□□ -2.2
TY1B-HO13535 YKR075W-AYKR075W-A 270 nt1.28□□□□□ -2.2
TY1B-HO13535 YML009C-AYML009C-A 327 nt1.28□□□□□ -2.2
TY1B-HO13535 LSM2YBL026W 288 nt1.28□□□□□ -2.2
TY1B-HO13535 CDC37YDR168W 1521 nt1.27□□□□□ -2.21
TY1B-HO13535 AIM41YOR215C 558 nt1.27□□□□□ -2.21
TY1B-HO13535 YBR292CYBR292C 372 nt1.27□□□□□ -2.21
TY1B-HO13535 YER087C-AYER087C-A 552 nt1.26□□□□□ -2.21
TY1B-HO13535 RPL11BYGR085C 525 nt1.26□□□□□ -2.21
TY1B-HO13535 YBL094CYBL094C 333 nt1.26□□□□□ -2.21
TY1B-HO13535 MGE1YOR232W 687 nt1.26□□□□□ -2.21
TY1B-HO13535 SPO24YPR036W-A 204 nt1.26□□□□□ -2.21
TY1B-HO13535 RPL11AYPR102C 525 nt1.26□□□□□ -2.21
TY1B-HO13535 SEC21YNL287W 2808 nt1.26□□□□□ -2.21
TY1B-HO13535 BUL2YML111W 2763 nt1.26□□□□□ -2.21
TY1B-HO13535 MAL33YBR297W 1407 nt1.26□□□□□ -2.21
TY1B-HO13535 MFB1YDR219C 1398 nt1.26□□□□□ -2.21
TY1B-HO13535 RNH202YDR279W 1053 nt1.26□□□□□ -2.21
TY1B-HO13535 YMR31YFR049W 372 nt1.26□□□□□ -2.21
TY1B-HO13535 MSA2YKR077W 1092 nt1.26□□□□□ -2.21
TY1B-HO13535 YMR099CYMR099C 894 nt1.26□□□□□ -2.21
TY1B-HO13535 VTI1YMR197C 654 nt1.26□□□□□ -2.21
TY1B-HO13535 SHU2YDR078C 672 nt1.25□□□□□ -2.21
TY1B-HO13535 YFL041W-AYFL041W-A 192 nt1.25□□□□□ -2.21
TY1B-HO13535 SFG1YOR315W 1041 nt1.25□□□□□ -2.21
TY1B-HO13535 BRO1YPL084W 2535 nt1.25□□□□□ -2.21
TY1B-HO13535 YDR521WYDR521W 336 nt1.24□□□□□ -2.21
TY1B-HO13535 YFR010W-AYFR010W-A 189 nt1.24□□□□□ -2.21
TY1B-HO13535 YGL165CYGL165C 579 nt1.24□□□□□ -2.21
TY1B-HO13535 RGI2YIL057C 495 nt1.24□□□□□ -2.21
TY1B-HO13535 SRN2YLR119W 642 nt1.24□□□□□ -2.21
TY1B-HO13535 UBC7YMR022W 498 nt1.24□□□□□ -2.21
TY1B-HO13535 YNL234WYNL234W 1281 nt1.24□□□□□ -2.21
TY1B-HO13535 RMD5YDR255C 1266 nt1.24□□□□□ -2.21
TY1B-HO13535 PIN3YPR154W 648 nt1.24□□□□□ -2.21
TY1B-HO13535 RRP6YOR001W 2202 nt1.23□□□□□ -2.21
TY1B-HO13535 SLF1YDR515W 1344 nt1.23□□□□□ -2.21
TY1B-HO13535 PUF4YGL014W 2667 nt1.23□□□□□ -2.21
TY1B-HO13535 PFK27YOL136C 1194 nt1.23□□□□□ -2.21
TY1B-HO13535 DAL5YJR152W 1632 nt1.22□□□□□ -2.21
TY1B-HO13535 YDR124WYDR124W 975 nt1.22□□□□□ -2.21
TY1B-HO13535 YER107W-AYER107W-A 321 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)BtT(AGU)B 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)CtT(AGU)C 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)DtT(AGU)D 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)HtT(AGU)H 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)I1tT(AGU)I1 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)I2tT(AGU)I2 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)JtT(AGU)J 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)N1tT(AGU)N1 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)N2tT(AGU)N2 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)O1tT(AGU)O1 73 nt1.22□□□□□ -2.21
TY1B-HO13535 tT(AGU)O2tT(AGU)O2 73 nt1.22□□□□□ -2.21
TY1B-HO13535 HRT3YLR097C 1035 nt1.22□□□□□ -2.21
TY1B-HO13535 YMR052C-AYMR052C-A 366 nt1.22□□□□□ -2.21
TY1B-HO13535 YOR218CYOR218C 420 nt1.22□□□□□ -2.21
TY1B-HO13535 ATG5YPL149W 885 nt1.22□□□□□ -2.21
TY1B-HO13535 RSM22YKL155C 1887 nt1.22□□□□□ -2.21
TY1B-HO13535 VAM6YDL077C 3150 nt1.21□□□□□ -2.22
TY1B-HO13535 ACB1YGR037C 264 nt1.21□□□□□ -2.22
TY1B-HO13535 YLR444CYLR444C 303 nt1.21□□□□□ -2.22
TY1B-HO13535 CMC4YMR194C-B 222 nt1.21□□□□□ -2.22
TY1B-HO13535 YBR201C-AYBR201C-A 204 nt1.21□□□□□ -2.22
TY1B-HO13535 APC5YOR249C 2058 nt1.21□□□□□ -2.22
TY1B-HO13535 FIG2YCR089W 4830 nt1.21□□□□□ -2.22
TY1B-HO13535 MED8YBR193C 672 nt1.21□□□□□ -2.22
TY1B-HO13535 THO2YNL139C 4794 nt1.2□□□□□ -2.22
TY1B-HO13535 GLC7YER133W 939 nt1.2□□□□□ -2.22
TY1B-HO13535 YIL059CYIL059C 366 nt1.2□□□□□ -2.22
TY1B-HO13535 YIL161WYIL161W 708 nt1.2□□□□□ -2.22
TY1B-HO13535 YLR290CYLR290C 834 nt1.2□□□□□ -2.22
TY1B-HO13535 LEU3YLR451W 2661 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 39.9 ms