Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 AC106739.1-201ENST00000617035 715 ntBASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV8-6A0A0B4J262 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 EDA-201ENST00000338901 1233 ntBASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 BX842568.3-201ENST00000418104 571 ntBASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 AC126544.1-201ENST00000580842 1059 ntBASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 AL139246.5-201ENST00000606645 996 ntBASIC15.02■□□□□ -0
TRAV8-6A0A0B4J262 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-6A0A0B4J262 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 AC233992.3-201ENST00000607491 485 ntBASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-6A0A0B4J262 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms