Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TMEM56-RWDD3S4R434 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 BX842568.3-201ENST00000418104 571 ntBASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM56-RWDD3S4R434 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 GUSBP5-201ENST00000418136 578 ntBASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 AP004607.4-201ENST00000530158 1459 ntBASIC16.78■□□□□ 0.28
TMEM56-RWDD3S4R434 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM56-RWDD3S4R434 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM56-RWDD3S4R434 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 AC018445.3-201ENST00000624177 1945 ntBASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 MIR4466-201ENST00000606121 54 ntBASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 AC087289.5-201ENST00000586076 3175 ntBASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM56-RWDD3S4R434 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms