Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 CDV3P1-201ENST00000471403 739 ntBASIC19.82■□□□□ 0.76
KRT78Q8N1N4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT78Q8N1N4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT78Q8N1N4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 AC007322.3-201ENST00000426526 701 ntBASIC19.8■□□□□ 0.76
KRT78Q8N1N4 AC006015.1-201ENST00000429970 570 ntBASIC19.8■□□□□ 0.76
KRT78Q8N1N4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT78Q8N1N4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 AC022517.1-201ENST00000592429 346 ntBASIC19.79■□□□□ 0.76
KRT78Q8N1N4 AC013268.1-206ENST00000638368 961 ntBASIC19.79■□□□□ 0.76
KRT78Q8N1N4 AC112229.1-201ENST00000639295 961 ntBASIC19.79■□□□□ 0.76
KRT78Q8N1N4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT78Q8N1N4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 MFSD11-216ENST00000590393 1141 ntBASIC19.78■□□□□ 0.76
KRT78Q8N1N4 AL591742.1-201ENST00000604433 565 ntBASIC19.78■□□□□ 0.76
KRT78Q8N1N4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.78■□□□□ 0.76
KRT78Q8N1N4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT78Q8N1N4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms