Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 RRP12YPL012W 3687 nt2.49□□□□□ -2.01
VPS9P54787 YRR1YOR162C 2433 nt2.49□□□□□ -2.01
VPS9P54787 PRP6YBR055C 2700 nt2.48□□□□□ -2.01
VPS9P54787 YAL026C-AYAL026C-A 438 nt2.48□□□□□ -2.01
VPS9P54787 YNL235CYNL235C 432 nt2.48□□□□□ -2.01
VPS9P54787 YBR063CYBR063C 1215 nt2.48□□□□□ -2.01
VPS9P54787 RGL1YPL066W 1440 nt2.48□□□□□ -2.01
VPS9P54787 YDR186CYDR186C 2634 nt2.48□□□□□ -2.01
VPS9P54787 YNL034WYNL034W 1839 nt2.47□□□□□ -2.01
VPS9P54787 YDR115WYDR115W 318 nt2.47□□□□□ -2.01
VPS9P54787 RSM18YER050C 417 nt2.47□□□□□ -2.01
VPS9P54787 YGL165CYGL165C 579 nt2.47□□□□□ -2.01
VPS9P54787 SYS1YJL004C 612 nt2.47□□□□□ -2.01
VPS9P54787 UBC12YLR306W 567 nt2.47□□□□□ -2.01
VPS9P54787 YNL050CYNL050C 813 nt2.47□□□□□ -2.01
VPS9P54787 YOL150CYOL150C 312 nt2.47□□□□□ -2.01
VPS9P54787 ATP20YPR020W 348 nt2.47□□□□□ -2.01
VPS9P54787 VPS16YPL045W 2397 nt2.47□□□□□ -2.01
VPS9P54787 SMC6YLR383W 3345 nt2.47□□□□□ -2.01
VPS9P54787 TDA2YER071C 381 nt2.46□□□□□ -2.02
VPS9P54787 YGR109W-AYGR109W-A 873 nt2.46□□□□□ -2.02
VPS9P54787 PRS3YHL011C 963 nt2.46□□□□□ -2.02
VPS9P54787 YIL082WYIL082W 873 nt2.46□□□□□ -2.02
VPS9P54787 YJL147CYJL147C 1149 nt2.46□□□□□ -2.02
VPS9P54787 YLR154W-EYLR154W-E 204 nt2.46□□□□□ -2.02
VPS9P54787 KTI11YBL071W-A 249 nt2.46□□□□□ -2.02
VPS9P54787 RIO2YNL207W 1278 nt2.46□□□□□ -2.02
VPS9P54787 LCL1YPL056C 306 nt2.46□□□□□ -2.02
VPS9P54787 YBR197CYBR197C 654 nt2.46□□□□□ -2.02
VPS9P54787 YBR277CYBR277C 402 nt2.46□□□□□ -2.02
VPS9P54787 YCL002CYCL002C 792 nt2.46□□□□□ -2.02
VPS9P54787 USO1YDL058W 5373 nt2.46□□□□□ -2.02
VPS9P54787 OSW7YFR039C 1533 nt2.46□□□□□ -2.02
VPS9P54787 SSF2YDR312W 1362 nt2.46□□□□□ -2.02
VPS9P54787 TMN3YER113C 2121 nt2.45□□□□□ -2.02
VPS9P54787 MSB1YOR188W 3414 nt2.45□□□□□ -2.02
VPS9P54787 INP53YOR109W 3324 nt2.45□□□□□ -2.02
VPS9P54787 YGR293CYGR293C 462 nt2.45□□□□□ -2.02
VPS9P54787 YJL119CYJL119C 324 nt2.45□□□□□ -2.02
VPS9P54787 YNL046WYNL046W 519 nt2.45□□□□□ -2.02
VPS9P54787 YNL179CYNL179C 438 nt2.45□□□□□ -2.02
VPS9P54787 SRL4YPL033C 846 nt2.45□□□□□ -2.02
VPS9P54787 YPR170CYPR170C 336 nt2.45□□□□□ -2.02
VPS9P54787 NAB6YML117W 3405 nt2.45□□□□□ -2.02
VPS9P54787 GDI1YER136W 1356 nt2.45□□□□□ -2.02
VPS9P54787 GIP3YPL137C 3831 nt2.45□□□□□ -2.02
VPS9P54787 RPN3YER021W 1572 nt2.44□□□□□ -2.02
VPS9P54787 SCD5YOR329C 2619 nt2.44□□□□□ -2.02
VPS9P54787 YKR078WYKR078W 1758 nt2.44□□□□□ -2.02
VPS9P54787 KSP1YHR082C 3090 nt2.44□□□□□ -2.02
VPS9P54787 SAK1YER129W 3429 nt2.44□□□□□ -2.02
VPS9P54787 snR59snR59 78 nt2.44□□□□□ -2.02
VPS9P54787 SDC1YDR469W 528 nt2.44□□□□□ -2.02
VPS9P54787 YAP5YIR018W 738 nt2.44□□□□□ -2.02
VPS9P54787 YPL034WYPL034W 498 nt2.44□□□□□ -2.02
VPS9P54787 NSL1YPL233W 651 nt2.44□□□□□ -2.02
VPS9P54787 STE11YLR362W 2154 nt2.44□□□□□ -2.02
VPS9P54787 NUP100YKL068W 2880 nt2.43□□□□□ -2.02
VPS9P54787 ASG1YIL130W 2895 nt2.43□□□□□ -2.02
VPS9P54787 YCR064CYCR064C 411 nt2.43□□□□□ -2.02
VPS9P54787 YFH1YDL120W 525 nt2.43□□□□□ -2.02
VPS9P54787 FAR7YFR008W 666 nt2.43□□□□□ -2.02
VPS9P54787 SDS22YKL193C 1017 nt2.43□□□□□ -2.02
VPS9P54787 UTP30YKR060W 825 nt2.43□□□□□ -2.02
VPS9P54787 YLR224WYLR224W 1110 nt2.43□□□□□ -2.02
VPS9P54787 SNU114YKL173W 3027 nt2.43□□□□□ -2.02
VPS9P54787 CSF1YLR087C 8877 nt2.42□□□□□ -2.02
VPS9P54787 VPS13YLL040C 9435 nt2.42□□□□□ -2.02
VPS9P54787 MRP10YDL045W-A 288 nt2.42□□□□□ -2.02
VPS9P54787 VPS74YDR372C 1038 nt2.42□□□□□ -2.02
VPS9P54787 YGL042CYGL042C 306 nt2.42□□□□□ -2.02
VPS9P54787 RPS17AYML024W 411 nt2.42□□□□□ -2.02
VPS9P54787 RSA1YPL193W 1146 nt2.42□□□□□ -2.02
VPS9P54787 TAZ1YPR140W 1146 nt2.42□□□□□ -2.02
VPS9P54787 YBR209WYBR209W 318 nt2.42□□□□□ -2.02
VPS9P54787 TRS130YMR218C 3309 nt2.42□□□□□ -2.02
VPS9P54787 PRK1YIL095W 2433 nt2.42□□□□□ -2.02
VPS9P54787 SCP160YJL080C 3669 nt2.42□□□□□ -2.02
VPS9P54787 GIS1YDR096W 2685 nt2.42□□□□□ -2.02
VPS9P54787 STD1YOR047C 1335 nt2.42□□□□□ -2.02
VPS9P54787 VTC3YPL019C 2508 nt2.41□□□□□ -2.02
VPS9P54787 YEL043WYEL043W 2871 nt2.41□□□□□ -2.02
VPS9P54787 SVL3YPL032C 2478 nt2.41□□□□□ -2.02
VPS9P54787 PES4YFR023W 1836 nt2.41□□□□□ -2.02
VPS9P54787 MND1YGL183C 660 nt2.41□□□□□ -2.02
VPS9P54787 COG2YGR120C 789 nt2.41□□□□□ -2.02
VPS9P54787 PAU14YIL176C 363 nt2.41□□□□□ -2.02
VPS9P54787 PAU1YJL223C 363 nt2.41□□□□□ -2.02
VPS9P54787 ACF4YJR083C 930 nt2.41□□□□□ -2.02
VPS9P54787 BET3YKR068C 582 nt2.41□□□□□ -2.02
VPS9P54787 YLR154W-AYLR154W-A 186 nt2.41□□□□□ -2.02
VPS9P54787 YMR144WYMR144W 1029 nt2.41□□□□□ -2.02
VPS9P54787 MLH1YMR167W 2310 nt2.41□□□□□ -2.02
VPS9P54787 NUP170YBL079W 4509 nt2.41□□□□□ -2.02
VPS9P54787 SHE4YOR035C 2370 nt2.41□□□□□ -2.02
VPS9P54787 ECM5YMR176W 4236 nt2.4□□□□□ -2.02
VPS9P54787 GPM2YDL021W 936 nt2.4□□□□□ -2.03
VPS9P54787 SSE1YPL106C 2082 nt2.4□□□□□ -2.03
VPS9P54787 BNI1YNL271C 5862 nt2.39□□□□□ -2.03
VPS9P54787 snR5snR5 204 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms