Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YLR157C-BYLR157C-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YML039WYML039W 5268 nt2.82□□□□□ -1.96
SUB1P54000 YML045WYML045W 5268 nt2.82□□□□□ -1.96
SUB1P54000 YMR050CYMR050C 5268 nt2.82□□□□□ -1.96
SUB1P54000 YOL103W-BYOL103W-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YBR012W-BYBR012W-B 5271 nt2.82□□□□□ -1.96
SUB1P54000 YOR142W-BYOR142W-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YPL257W-BYPL257W-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YPR158W-BYPR158W-B 5271 nt2.82□□□□□ -1.96
SUB1P54000 RRP6YOR001W 2202 nt2.81□□□□□ -1.96
SUB1P54000 YDL009CYDL009C 324 nt2.81□□□□□ -1.96
SUB1P54000 FMP16YDR070C 282 nt2.81□□□□□ -1.96
SUB1P54000 PPH3YDR075W 927 nt2.81□□□□□ -1.96
SUB1P54000 tR(UCU)Q1tR(UCU)Q1 73 nt2.81□□□□□ -1.96
SUB1P54000 HYR1YIR037W 492 nt2.81□□□□□ -1.96
SUB1P54000 RAM2YKL019W 951 nt2.81□□□□□ -1.96
SUB1P54000 SRP21YKL122C 504 nt2.81□□□□□ -1.96
SUB1P54000 YKL165C-AYKL165C-A 234 nt2.81□□□□□ -1.96
SUB1P54000 YMR194C-AYMR194C-A 225 nt2.81□□□□□ -1.96
SUB1P54000 YOR364WYOR364W 369 nt2.81□□□□□ -1.96
SUB1P54000 TAZ1YPR140W 1146 nt2.81□□□□□ -1.96
SUB1P54000 STD1YOR047C 1335 nt2.81□□□□□ -1.96
SUB1P54000 TRA1YHR099W 11235 nt2.81□□□□□ -1.96
SUB1P54000 NAN1YPL126W 2691 nt2.8□□□□□ -1.96
SUB1P54000 UBP11YKR098C 2154 nt2.8□□□□□ -1.96
SUB1P54000 YGR107WYGR107W 450 nt2.8□□□□□ -1.96
SUB1P54000 APC9YLR102C 798 nt2.8□□□□□ -1.96
SUB1P54000 YLR458WYLR458W 381 nt2.8□□□□□ -1.96
SUB1P54000 TAP42YMR028W 1101 nt2.8□□□□□ -1.96
SUB1P54000 ERG29YMR134W 714 nt2.8□□□□□ -1.96
SUB1P54000 YNL150WYNL150W 408 nt2.8□□□□□ -1.96
SUB1P54000 SCP160YJL080C 3669 nt2.8□□□□□ -1.96
SUB1P54000 YBL005W-BYBL005W-B 5268 nt2.79□□□□□ -1.96
SUB1P54000 YDR090CYDR090C 933 nt2.79□□□□□ -1.96
SUB1P54000 YDR537CYDR537C 606 nt2.79□□□□□ -1.96
SUB1P54000 RPL29YFR032C-A 180 nt2.79□□□□□ -1.96
SUB1P54000 YGR226CYGR226C 210 nt2.79□□□□□ -1.96
SUB1P54000 LAG1YHL003C 1236 nt2.79□□□□□ -1.96
SUB1P54000 YHR180W-AYHR180W-A 183 nt2.79□□□□□ -1.96
SUB1P54000 ATG38YLR211C 681 nt2.79□□□□□ -1.96
SUB1P54000 KTI11YBL071W-A 249 nt2.79□□□□□ -1.96
SUB1P54000 YBR063CYBR063C 1215 nt2.79□□□□□ -1.96
SUB1P54000 PTC5YOR090C 1719 nt2.79□□□□□ -1.96
SUB1P54000 NDD1YOR372C 1665 nt2.79□□□□□ -1.96
SUB1P54000 REV1YOR346W 2958 nt2.79□□□□□ -1.96
SUB1P54000 YIL058WYIL058W 285 nt2.78□□□□□ -1.96
SUB1P54000 YLR302CYLR302C 363 nt2.78□□□□□ -1.96
SUB1P54000 JIP3YLR331C 378 nt2.78□□□□□ -1.96
SUB1P54000 YLR379WYLR379W 375 nt2.78□□□□□ -1.96
SUB1P54000 TRS20YBR254C 528 nt2.78□□□□□ -1.96
SUB1P54000 POL3YDL102W 3294 nt2.78□□□□□ -1.96
SUB1P54000 PHO91YNR013C 2685 nt2.78□□□□□ -1.96
SUB1P54000 CDC53YDL132W 2448 nt2.78□□□□□ -1.97
SUB1P54000 TOF1YNL273W 3717 nt2.78□□□□□ -1.97
SUB1P54000 RUD3YOR216C 1455 nt2.77□□□□□ -1.97
SUB1P54000 YCR081C-AYCR081C-A 237 nt2.77□□□□□ -1.97
SUB1P54000 YHR054CYHR054C 1065 nt2.77□□□□□ -1.97
SUB1P54000 RPL40AYIL148W 387 nt2.77□□□□□ -1.97
SUB1P54000 YJL119CYJL119C 324 nt2.77□□□□□ -1.97
SUB1P54000 YJL147CYJL147C 1149 nt2.77□□□□□ -1.97
SUB1P54000 URA5YML106W 681 nt2.77□□□□□ -1.97
SUB1P54000 GPM2YDL021W 936 nt2.76□□□□□ -1.97
SUB1P54000 NCB2YDR397C 441 nt2.76□□□□□ -1.97
SUB1P54000 AAD16YFL057C 459 nt2.76□□□□□ -1.97
SUB1P54000 IST3YIR005W 447 nt2.76□□□□□ -1.97
SUB1P54000 MSL1YIR009W 336 nt2.76□□□□□ -1.97
SUB1P54000 LSM2YBL026W 288 nt2.76□□□□□ -1.97
SUB1P54000 MGR1YCL044C 1254 nt2.76□□□□□ -1.97
SUB1P54000 BUD2YKL092C 3315 nt2.76□□□□□ -1.97
SUB1P54000 BNI1YNL271C 5862 nt2.75□□□□□ -1.97
SUB1P54000 GAL80YML051W 1308 nt2.75□□□□□ -1.97
SUB1P54000 YPK1YKL126W 2043 nt2.75□□□□□ -1.97
SUB1P54000 AHC2YCR082W 387 nt2.75□□□□□ -1.97
SUB1P54000 RAD6YGL058W 519 nt2.75□□□□□ -1.97
SUB1P54000 ECM9YKR004C 1134 nt2.75□□□□□ -1.97
SUB1P54000 RIM9YMR063W 720 nt2.75□□□□□ -1.97
SUB1P54000 YNL050CYNL050C 813 nt2.75□□□□□ -1.97
SUB1P54000 IPT1YDR072C 1584 nt2.74□□□□□ -1.97
SUB1P54000 YME2YMR302C 2553 nt2.74□□□□□ -1.97
SUB1P54000 YJL070CYJL070C 2667 nt2.74□□□□□ -1.97
SUB1P54000 BCK1YJL095W 4437 nt2.74□□□□□ -1.97
SUB1P54000 HRI1YLR301W 735 nt2.74□□□□□ -1.97
SUB1P54000 GIP3YPL137C 3831 nt2.73□□□□□ -1.97
SUB1P54000 DFG10YIL049W 762 nt2.73□□□□□ -1.97
SUB1P54000 ATP18YML081C-A 180 nt2.73□□□□□ -1.97
SUB1P54000 TOA1YOR194C 861 nt2.73□□□□□ -1.97
SUB1P54000 KEL2YGR238C 2649 nt2.73□□□□□ -1.97
SUB1P54000 SAP185YJL098W 3177 nt2.72□□□□□ -1.97
SUB1P54000 NCL1YBL024W 2055 nt2.72□□□□□ -1.97
SUB1P54000 RTT101YJL047C 2529 nt2.72□□□□□ -1.97
SUB1P54000 snR5snR5 204 nt2.72□□□□□ -1.97
SUB1P54000 NBP1YLR457C 960 nt2.72□□□□□ -1.97
SUB1P54000 YJL181WYJL181W 1836 nt2.72□□□□□ -1.97
SUB1P54000 NIC96YFR002W 2520 nt2.72□□□□□ -1.97
SUB1P54000 VPH1YOR270C 2523 nt2.72□□□□□ -1.97
SUB1P54000 RRP12YPL012W 3687 nt2.72□□□□□ -1.97
SUB1P54000 YKR078WYKR078W 1758 nt2.72□□□□□ -1.97
SUB1P54000 YDR461C-AYDR461C-A 243 nt2.71□□□□□ -1.98
SUB1P54000 CSE4YKL049C 690 nt2.71□□□□□ -1.98
SUB1P54000 LSM7YNL147W 348 nt2.71□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 214.9 ms