Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 RPL29YFR032C-A 180 nt3.83□□□□□ -1.8
PUF4P25339 YGL074CYGL074C 327 nt3.83□□□□□ -1.8
PUF4P25339 YHR139C-AYHR139C-A 312 nt3.83□□□□□ -1.8
PUF4P25339 YBL108WYBL108W 306 nt3.83□□□□□ -1.8
PUF4P25339 snR36snR36 182 nt3.83□□□□□ -1.8
PUF4P25339 DIE2YGR227W 1578 nt3.83□□□□□ -1.8
PUF4P25339 SLP1YOR154W 1764 nt3.83□□□□□ -1.8
PUF4P25339 SIZ1YDR409W 2715 nt3.83□□□□□ -1.8
PUF4P25339 CHD1YER164W 4407 nt3.83□□□□□ -1.8
PUF4P25339 MED1YPR070W 1701 nt3.82□□□□□ -1.8
PUF4P25339 RPL1BYGL135W 654 nt3.82□□□□□ -1.8
PUF4P25339 SOD1YJR104C 465 nt3.82□□□□□ -1.8
PUF4P25339 AIM26YKL037W 357 nt3.82□□□□□ -1.8
PUF4P25339 BLI1YKL061W 342 nt3.82□□□□□ -1.8
PUF4P25339 RPL19BYBL027W 570 nt3.82□□□□□ -1.8
PUF4P25339 YPL152W-AYPL152W-A 99 nt3.82□□□□□ -1.8
PUF4P25339 RPL1AYPL220W 654 nt3.82□□□□□ -1.8
PUF4P25339 CHS3YBR023C 3498 nt3.82□□□□□ -1.8
PUF4P25339 CIN1YOR349W 3045 nt3.82□□□□□ -1.8
PUF4P25339 ALY1YKR021W 2748 nt3.82□□□□□ -1.8
PUF4P25339 NSP1YJL041W 2472 nt3.82□□□□□ -1.8
PUF4P25339 RAD4YER162C 2265 nt3.82□□□□□ -1.8
PUF4P25339 NMA111YNL123W 2994 nt3.81□□□□□ -1.8
PUF4P25339 ZDS2YML109W 2829 nt3.81□□□□□ -1.8
PUF4P25339 KIN82YCR091W 2163 nt3.81□□□□□ -1.8
PUF4P25339 REG1YDR028C 3045 nt3.81□□□□□ -1.8
PUF4P25339 GPI8YDR331W 1236 nt3.81□□□□□ -1.8
PUF4P25339 ATP17YDR377W 306 nt3.81□□□□□ -1.8
PUF4P25339 RMT2YDR465C 1239 nt3.81□□□□□ -1.8
PUF4P25339 YEL032C-AYEL032C-A 162 nt3.81□□□□□ -1.8
PUF4P25339 ERG28YER044C 447 nt3.81□□□□□ -1.8
PUF4P25339 OSH3YHR073W 2991 nt3.81□□□□□ -1.8
PUF4P25339 RPL39YJL189W 156 nt3.81□□□□□ -1.8
PUF4P25339 SHE2YKL130C 741 nt3.81□□□□□ -1.8
PUF4P25339 JIP3YLR331C 378 nt3.81□□□□□ -1.8
PUF4P25339 TVP18YMR071C 504 nt3.81□□□□□ -1.8
PUF4P25339 DGK1YOR311C 873 nt3.81□□□□□ -1.8
PUF4P25339 SPT6YGR116W 4356 nt3.8□□□□□ -1.8
PUF4P25339 PEX1YKL197C 3132 nt3.8□□□□□ -1.8
PUF4P25339 MSD1YPL104W 1977 nt3.8□□□□□ -1.8
PUF4P25339 RRT13YER066W 558 nt3.8□□□□□ -1.8
PUF4P25339 YKL033W-AYKL033W-A 711 nt3.8□□□□□ -1.8
PUF4P25339 MRP8YKL142W 660 nt3.8□□□□□ -1.8
PUF4P25339 ISF1YMR081C 1017 nt3.8□□□□□ -1.8
PUF4P25339 SLM6YBR266C 453 nt3.8□□□□□ -1.8 RIP-Chip
PUF4P25339 SLA1YBL007C 3735 nt3.79□□□□□ -1.8
PUF4P25339 RDS1YCR106W 2499 nt3.79□□□□□ -1.8
PUF4P25339 BCD1YHR040W 1101 nt3.79□□□□□ -1.8
PUF4P25339 PET191YJR034W 327 nt3.79□□□□□ -1.8
PUF4P25339 SRL3YKR091W 741 nt3.79□□□□□ -1.8
PUF4P25339 RPB11YOL005C 363 nt3.79□□□□□ -1.8
PUF4P25339 YGL140CYGL140C 3660 nt3.79□□□□□ -1.8
PUF4P25339 YDL180WYDL180W 1644 nt3.78□□□□□ -1.8
PUF4P25339 snR80snR80 171 nt3.78□□□□□ -1.8
PUF4P25339 YEL018C-AYEL018C-A 534 nt3.78□□□□□ -1.8
PUF4P25339 LSM8YJR022W 330 nt3.78□□□□□ -1.8
PUF4P25339 LSM2YBL026W 288 nt3.78□□□□□ -1.8
PUF4P25339 TIR2YOR010C 756 nt3.78□□□□□ -1.8
PUF4P25339 BIL1YOR304C-A 231 nt3.78□□□□□ -1.8
PUF4P25339 YCG1YDR325W 3108 nt3.78□□□□□ -1.8
PUF4P25339 ATG21YPL100W 1491 nt3.78□□□□□ -1.8
PUF4P25339 CWC22YGR278W 1734 nt3.78□□□□□ -1.8
PUF4P25339 SPC72YAL047C 1869 nt3.77□□□□□ -1.81
PUF4P25339 PHO81YGR233C 3537 nt3.77□□□□□ -1.81
PUF4P25339 FAA2YER015W 2235 nt3.77□□□□□ -1.81
PUF4P25339 YDR193WYDR193W 399 nt3.77□□□□□ -1.81
PUF4P25339 YDR464C-AYDR464C-A 189 nt3.77□□□□□ -1.81
PUF4P25339 tW(UCA)QtW(UCA)Q 74 nt3.77□□□□□ -1.81
PUF4P25339 RPS7BYNL096C 573 nt3.77□□□□□ -1.81
PUF4P25339 MSH2YOL090W 2895 nt3.77□□□□□ -1.81
PUF4P25339 RRN6YBL014C 2685 nt3.77□□□□□ -1.81
PUF4P25339 YPR022CYPR022C 3402 nt3.76□□□□□ -1.81
PUF4P25339 ARK1YNL020C 1917 nt3.76□□□□□ -1.81
PUF4P25339 YER076W-AYER076W-A 348 nt3.76□□□□□ -1.81
PUF4P25339 RAD6YGL058W 519 nt3.76□□□□□ -1.81
PUF4P25339 YIL012WYIL012W 342 nt3.76□□□□□ -1.81
PUF4P25339 YOL160WYOL160W 342 nt3.76□□□□□ -1.81
PUF4P25339 PWP2YCR057C 2772 nt3.76□□□□□ -1.81
PUF4P25339 SEA4YBL104C 3117 nt3.75□□□□□ -1.81
PUF4P25339 KAP95YLR347C 2586 nt3.75□□□□□ -1.81
PUF4P25339 STE14YDR410C 720 nt3.75□□□□□ -1.81 RIP-Chip
PUF4P25339 NOP19YGR251W 591 nt3.75□□□□□ -1.81
PUF4P25339 YJL015CYJL015C 285 nt3.75□□□□□ -1.81
PUF4P25339 YJL202CYJL202C 348 nt3.75□□□□□ -1.81
PUF4P25339 RPL37AYLR185W 267 nt3.75□□□□□ -1.81
PUF4P25339 RPL23AYBL087C 414 nt3.75□□□□□ -1.81 RIP-Chip
PUF4P25339 YPR099CYPR099C 357 nt3.75□□□□□ -1.81
PUF4P25339 YKL100CYKL100C 1764 nt3.75□□□□□ -1.81
PUF4P25339 PRP22YER013W 3438 nt3.75□□□□□ -1.81
PUF4P25339 NDT80YHR124W 1884 nt3.74□□□□□ -1.81
PUF4P25339 YHR214C-EYHR214C-E 300 nt3.74□□□□□ -1.81
PUF4P25339 YIR040CYIR040C 333 nt3.74□□□□□ -1.81
PUF4P25339 GPI13YLL031C 3054 nt3.74□□□□□ -1.81
PUF4P25339 YAR070CYAR070C 300 nt3.74□□□□□ -1.81
PUF4P25339 YBL008W-AYBL008W-A 240 nt3.74□□□□□ -1.81
PUF4P25339 MDM32YOR147W 1869 nt3.74□□□□□ -1.81
PUF4P25339 SPT10YJL127C 1923 nt3.74□□□□□ -1.81
PUF4P25339 ETP1YHL010C 1758 nt3.74□□□□□ -1.81
PUF4P25339 MYO5YMR109W 3660 nt3.73□□□□□ -1.81
PUF4P25339 TIF35YDR429C 825 nt3.73□□□□□ -1.81 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms