Protein–RNA interactions for Protein: P24276

SSD1, Protein SSD1, yeastyeast

Known RBP RIP-Chip data

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSD1P24276 SIP3YNL257C 3690 nt3.42□□□□□ -1.86
SSD1P24276 UTP13YLR222C 2454 nt3.41□□□□□ -1.86
SSD1P24276 YER039C-AYER039C-A 219 nt3.41□□□□□ -1.86
SSD1P24276 YER087C-AYER087C-A 552 nt3.41□□□□□ -1.86
SSD1P24276 GLC7YER133W 939 nt3.41□□□□□ -1.86
SSD1P24276 YHR125WYHR125W 306 nt3.41□□□□□ -1.86
SSD1P24276 TPM2YIL138C 486 nt3.41□□□□□ -1.86
SSD1P24276 TIF11YMR260C 462 nt3.41□□□□□ -1.86
SSD1P24276 ISU1YPL135W 498 nt3.41□□□□□ -1.86
SSD1P24276 APC2YLR127C 2562 nt3.41□□□□□ -1.86
SSD1P24276 YMR317WYMR317W 3423 nt3.41□□□□□ -1.86
SSD1P24276 TIF35YDR429C 825 nt3.4□□□□□ -1.87
SSD1P24276 YER006C-AYER006C-A 318 nt3.4□□□□□ -1.87
SSD1P24276 YMR31YFR049W 372 nt3.4□□□□□ -1.87
SSD1P24276 LAG1YHL003C 1236 nt3.4□□□□□ -1.87
SSD1P24276 YIL054WYIL054W 318 nt3.4□□□□□ -1.87
SSD1P24276 GIS2YNL255C 462 nt3.4□□□□□ -1.87
SSD1P24276 YTA7YGR270W 4140 nt3.4□□□□□ -1.87
SSD1P24276 TRZ1YKR079C 2517 nt3.39□□□□□ -1.87
SSD1P24276 NTO1YPR031W 2247 nt3.39□□□□□ -1.87
SSD1P24276 CHO2YGR157W 2610 nt3.39□□□□□ -1.87
SSD1P24276 YHR138CYHR138C 345 nt3.39□□□□□ -1.87
SSD1P24276 RPL20AYMR242C 519 nt3.39□□□□□ -1.87
SSD1P24276 SPO14YKR031C 5052 nt3.39□□□□□ -1.87
SSD1P24276 RPA190YOR341W 4995 nt3.38□□□□□ -1.87
SSD1P24276 YAR047CYAR047C 321 nt3.38□□□□□ -1.87
SSD1P24276 PKR1YMR123W 369 nt3.38□□□□□ -1.87
SSD1P24276 CMC2YBL059C-A 330 nt3.38□□□□□ -1.87
SSD1P24276 YMR316C-AYMR316C-A 312 nt3.38□□□□□ -1.87
SSD1P24276 COG3YER157W 2406 nt3.38□□□□□ -1.87
SSD1P24276 NPR1YNL183C 2373 nt3.37□□□□□ -1.87
SSD1P24276 ATG21YPL100W 1491 nt3.37□□□□□ -1.87
SSD1P24276 ATG31YDR022C 591 nt3.37□□□□□ -1.87
SSD1P24276 TIM11YDR322C-A 291 nt3.37□□□□□ -1.87 RIP-Chip
SSD1P24276 YHL006W-AYHL006W-A 354 nt3.37□□□□□ -1.87
SSD1P24276 YIL175WYIL175W 318 nt3.37□□□□□ -1.87
SSD1P24276 IRC19YLL033W 693 nt3.37□□□□□ -1.87
SSD1P24276 YLR101CYLR101C 396 nt3.37□□□□□ -1.87
SSD1P24276 RMP1YLR145W 606 nt3.37□□□□□ -1.87
SSD1P24276 YOL159CYOL159C 516 nt3.37□□□□□ -1.87
SSD1P24276 IRC16YPR038W 360 nt3.37□□□□□ -1.87
SSD1P24276 RLF2YPR018W 1821 nt3.37□□□□□ -1.87
SSD1P24276 VTC4YJL012C 2166 nt3.36□□□□□ -1.87
SSD1P24276 SPE1YKL184W 1401 nt3.36□□□□□ -1.87
SSD1P24276 PES4YFR023W 1836 nt3.36□□□□□ -1.87
SSD1P24276 SMB1YER029C 591 nt3.36□□□□□ -1.87
SSD1P24276 BET3YKR068C 582 nt3.36□□□□□ -1.87
SSD1P24276 YLR012CYLR012C 300 nt3.36□□□□□ -1.87
SSD1P24276 YBR012CYBR012C 420 nt3.36□□□□□ -1.87
SSD1P24276 YEL025CYEL025C 3567 nt3.36□□□□□ -1.87
SSD1P24276 CHA4YLR098C 1947 nt3.36□□□□□ -1.87
SSD1P24276 KIN82YCR091W 2163 nt3.35□□□□□ -1.87
SSD1P24276 YER135CYER135C 393 nt3.35□□□□□ -1.87
SSD1P24276 YER189WYER189W 369 nt3.35□□□□□ -1.87
SSD1P24276 RAD6YGL058W 519 nt3.35□□□□□ -1.87
SSD1P24276 RPS21AYKR057W 264 nt3.35□□□□□ -1.87
SSD1P24276 YLR230WYLR230W 306 nt3.35□□□□□ -1.87
SSD1P24276 YNL058CYNL058C 951 nt3.35□□□□□ -1.87
SSD1P24276 YPL039WYPL039W 951 nt3.35□□□□□ -1.87
SSD1P24276 MIT1YEL007W 2001 nt3.35□□□□□ -1.87
SSD1P24276 CCT7YJL111W 1653 nt3.34□□□□□ -1.87
SSD1P24276 SNF12YNR023W 1701 nt3.34□□□□□ -1.87
SSD1P24276 TSA2YDR453C 591 nt3.34□□□□□ -1.87
SSD1P24276 PAU23YLR037C 375 nt3.34□□□□□ -1.87
SSD1P24276 LSM2YBL026W 288 nt3.34□□□□□ -1.87
SSD1P24276 YOR248WYOR248W 303 nt3.34□□□□□ -1.87 RIP-Chip
SSD1P24276 RSN1YMR266W 2862 nt3.33□□□□□ -1.88
SSD1P24276 RPL30YGL030W 318 nt3.33□□□□□ -1.88
SSD1P24276 YPS5YGL259W 498 nt3.33□□□□□ -1.88
SSD1P24276 SPT4YGR063C 309 nt3.33□□□□□ -1.88
SSD1P24276 FRE2YKL220C 2136 nt3.33□□□□□ -1.88
SSD1P24276 RPB11YOL005C 363 nt3.33□□□□□ -1.88
SSD1P24276 YOR029WYOR029W 336 nt3.33□□□□□ -1.88
SSD1P24276 NSL1YPL233W 651 nt3.33□□□□□ -1.88
SSD1P24276 YPR014CYPR014C 330 nt3.33□□□□□ -1.88
SSD1P24276 RRM3YHR031C 2172 nt3.33□□□□□ -1.88
SSD1P24276 YHR214C-CYHR214C-C 1437 nt3.33□□□□□ -1.88
SSD1P24276 DUG2YBR281C 2637 nt3.33□□□□□ -1.88
SSD1P24276 BAS1YKR099W 2436 nt3.32□□□□□ -1.88
SSD1P24276 SSN2YDR443C 4263 nt3.32□□□□□ -1.88
SSD1P24276 BMH2YDR099W 822 nt3.32□□□□□ -1.88
SSD1P24276 YGR107WYGR107W 450 nt3.32□□□□□ -1.88
SSD1P24276 SOD1YJR104C 465 nt3.32□□□□□ -1.88
SSD1P24276 YBR012W-AYBR012W-A 1323 nt3.32□□□□□ -1.88
SSD1P24276 YOR142W-AYOR142W-A 1323 nt3.32□□□□□ -1.88
SSD1P24276 YPR158W-AYPR158W-A 1323 nt3.32□□□□□ -1.88
SSD1P24276 ECM21YBL101C 3354 nt3.31□□□□□ -1.88
SSD1P24276 PSK2YOL045W 3306 nt3.31□□□□□ -1.88
SSD1P24276 RGC1YPR115W 3252 nt3.31□□□□□ -1.88
SSD1P24276 GCV2YMR189W 3105 nt3.31□□□□□ -1.88
SSD1P24276 POL2YNL262W 6669 nt3.31□□□□□ -1.88
SSD1P24276 FLO1YAR050W 4614 nt3.31□□□□□ -1.88
SSD1P24276 MRH1YDR033W 963 nt3.31□□□□□ -1.88
SSD1P24276 SWF1YDR126W 1011 nt3.31□□□□□ -1.88
SSD1P24276 tQ(UUG)BtQ(UUG)B 72 nt3.31□□□□□ -1.88
SSD1P24276 CRG1YHR209W 876 nt3.31□□□□□ -1.88
SSD1P24276 YAL026C-AYAL026C-A 438 nt3.31□□□□□ -1.88
SSD1P24276 RPL37AYLR185W 267 nt3.31□□□□□ -1.88
SSD1P24276 YPL197CYPL197C 414 nt3.31□□□□□ -1.88
SSD1P24276 DBP7YKR024C 2229 nt3.31□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms