Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UPK1BO75841 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK1BO75841 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.97■□□□□ 0.47
UPK1BO75841 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UPK1BO75841 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UPK1BO75841 ZNRF2P2-203ENST00000454624 420 ntBASIC17.97■□□□□ 0.47
UPK1BO75841 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK1BO75841 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.97■□□□□ 0.47
UPK1BO75841 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 AC093484.2-201ENST00000580996 2166 ntBASIC17.97■□□□□ 0.47
UPK1BO75841 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK1BO75841 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK1BO75841 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK1BO75841 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UPK1BO75841 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
UPK1BO75841 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.96■□□□□ 0.47
UPK1BO75841 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1BO75841 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.96■□□□□ 0.47
UPK1BO75841 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1BO75841 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UPK1BO75841 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1BO75841 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.96■□□□□ 0.47
UPK1BO75841 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPK1BO75841 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UPK1BO75841 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
UPK1BO75841 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK1BO75841 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UPK1BO75841 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK1BO75841 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UPK1BO75841 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.95■□□□□ 0.46
UPK1BO75841 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.95■□□□□ 0.46
UPK1BO75841 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
UPK1BO75841 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UPK1BO75841 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPK1BO75841 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
UPK1BO75841 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.94■□□□□ 0.46
UPK1BO75841 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.94■□□□□ 0.46
UPK1BO75841 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1BO75841 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1BO75841 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1BO75841 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1BO75841 AL138781.2-201ENST00000617896 1843 ntBASIC17.94■□□□□ 0.46
UPK1BO75841 AC022616.5-201ENST00000518796 181 ntBASIC17.94■□□□□ 0.46
UPK1BO75841 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1BO75841 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPK1BO75841 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UPK1BO75841 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
UPK1BO75841 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.93■□□□□ 0.46
UPK1BO75841 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.93■□□□□ 0.46
UPK1BO75841 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.93■□□□□ 0.46
UPK1BO75841 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
UPK1BO75841 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UPK1BO75841 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPK1BO75841 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms