Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 RARRES2P11-201ENST00000635158 484 ntBASIC18.01■□□□□ 0.47
CDH20Q9HBT6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18■□□□□ 0.47
CDH20Q9HBT6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18■□□□□ 0.47
CDH20Q9HBT6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18■□□□□ 0.47
CDH20Q9HBT6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18■□□□□ 0.47
CDH20Q9HBT6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 AC007375.3-201ENST00000600936 2314 ntBASIC18■□□□□ 0.47
CDH20Q9HBT6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH20Q9HBT6 AC026310.3-201ENST00000625186 2373 ntBASIC17.99■□□□□ 0.47
CDH20Q9HBT6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 AC007322.1-201ENST00000426983 750 ntBASIC17.99■□□□□ 0.47
CDH20Q9HBT6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 AC231657.2-201ENST00000624556 255 ntBASIC17.99■□□□□ 0.47
CDH20Q9HBT6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 AL049796.1-201ENST00000565336 1766 ntBASIC17.99■□□□□ 0.47
CDH20Q9HBT6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH20Q9HBT6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 DUX4L16-201ENST00000555130 1264 ntBASIC17.98■□□□□ 0.47
CDH20Q9HBT6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH20Q9HBT6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 CDV3P1-201ENST00000471403 739 ntBASIC17.97■□□□□ 0.47
CDH20Q9HBT6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 AC073111.5-205ENST00000641717 521 ntBASIC17.97■□□□□ 0.47
CDH20Q9HBT6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH20Q9HBT6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDH20Q9HBT6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH20Q9HBT6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms