Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 AC073130.3-201ENST00000624389 2278 ntBASIC21.42■■□□□ 1.02
RFX6Q8HWS3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFX6Q8HWS3 AC092667.1-201ENST00000434301 2586 ntBASIC21.42■■□□□ 1.02
RFX6Q8HWS3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 FP700111.2-201ENST00000619190 1892 ntBASIC21.41■■□□□ 1.02
RFX6Q8HWS3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RFX6Q8HWS3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 AC073314.1-201ENST00000568729 2216 ntBASIC21.4■■□□□ 1.02
RFX6Q8HWS3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFX6Q8HWS3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFX6Q8HWS3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFX6Q8HWS3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFX6Q8HWS3 AP005212.1-201ENST00000581547 1997 ntBASIC21.37■■□□□ 1.01
RFX6Q8HWS3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms