Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.26■□□□□ 0.67
TRMT12Q53H54 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.26■□□□□ 0.67
TRMT12Q53H54 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.26■□□□□ 0.67
TRMT12Q53H54 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
TRMT12Q53H54 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TRMT12Q53H54 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.26■□□□□ 0.67
TRMT12Q53H54 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRMT12Q53H54 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRMT12Q53H54 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.25■□□□□ 0.67
TRMT12Q53H54 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRMT12Q53H54 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
TRMT12Q53H54 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRMT12Q53H54 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.25■□□□□ 0.67
TRMT12Q53H54 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRMT12Q53H54 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.24■□□□□ 0.67
TRMT12Q53H54 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 AC004911.1-201ENST00000416316 871 ntBASIC19.24■□□□□ 0.67
TRMT12Q53H54 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.24■□□□□ 0.67
TRMT12Q53H54 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRMT12Q53H54 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT12Q53H54 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT12Q53H54 CNN2P6-201ENST00000439038 900 ntBASIC19.23■□□□□ 0.67
TRMT12Q53H54 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 AC013268.1-206ENST00000638368 961 ntBASIC19.23■□□□□ 0.67
TRMT12Q53H54 AC112229.1-201ENST00000639295 961 ntBASIC19.23■□□□□ 0.67
TRMT12Q53H54 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT12Q53H54 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRMT12Q53H54 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRMT12Q53H54 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 AC007322.3-201ENST00000426526 701 ntBASIC19.22■□□□□ 0.67
TRMT12Q53H54 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 AL137784.2-201ENST00000607332 1000 ntBASIC19.22■□□□□ 0.67
TRMT12Q53H54 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRMT12Q53H54 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.22■□□□□ 0.67
TRMT12Q53H54 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms