Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 SRC1YML034W 2505 nt4.02□□□□□ -1.77
PUF3Q07807 FAT1YBR041W 2010 nt4.02□□□□□ -1.77
PUF3Q07807 YDR340WYDR340W 303 nt4.02□□□□□ -1.77
PUF3Q07807 ATP17YDR377W 306 nt4.02□□□□□ -1.77
PUF3Q07807 RPS8BYER102W 603 nt4.02□□□□□ -1.77
PUF3Q07807 YFR054CYFR054C 579 nt4.02□□□□□ -1.77
PUF3Q07807 YHR214C-EYHR214C-E 300 nt4.02□□□□□ -1.77
PUF3Q07807 IRC18YJL037W 675 nt4.02□□□□□ -1.77
PUF3Q07807 LCL2YLR104W 396 nt4.02□□□□□ -1.77
PUF3Q07807 YOL155W-AYOL155W-A 135 nt4.02□□□□□ -1.77
PUF3Q07807 RPB2YOR151C 3675 nt4.02□□□□□ -1.77
PUF3Q07807 MCD4YKL165C 2760 nt4.02□□□□□ -1.77
PUF3Q07807 EPO1YMR124W 2832 nt4.01□□□□□ -1.77
PUF3Q07807 EXO70YJL085W 1872 nt4.01□□□□□ -1.77
PUF3Q07807 SPC72YAL047C 1869 nt4.01□□□□□ -1.77
PUF3Q07807 YFR056CYFR056C 369 nt4.01□□□□□ -1.77
PUF3Q07807 SGN1YIR001C 753 nt4.01□□□□□ -1.77
PUF3Q07807 RPL16BYNL069C 597 nt4.01□□□□□ -1.77
PUF3Q07807 YBL073WYBL073W 312 nt4.01□□□□□ -1.77
PUF3Q07807 YPL238CYPL238C 390 nt4.01□□□□□ -1.77
PUF3Q07807 MLH2YLR035C 2088 nt4.01□□□□□ -1.77 RIP-Chip
PUF3Q07807 MCD1YDL003W 1701 nt4.01□□□□□ -1.77
PUF3Q07807 GPI10YGL142C 1851 nt4.01□□□□□ -1.77
PUF3Q07807 KIP3YGL216W 2418 nt4□□□□□ -1.77
PUF3Q07807 COA4YLR218C 453 nt4□□□□□ -1.77 RIP-Chip
PUF3Q07807 RPS7BYNL096C 573 nt4□□□□□ -1.77
PUF3Q07807 YLR177WYLR177W 1887 nt4□□□□□ -1.77 RIP-Chip
PUF3Q07807 UTP25YIL091C 2166 nt4□□□□□ -1.77 RIP-Chip
PUF3Q07807 VPS9YML097C 1356 nt4□□□□□ -1.77
PUF3Q07807 YDL180WYDL180W 1644 nt3.99□□□□□ -1.77
PUF3Q07807 ICR1ICR1 3199 nt3.99□□□□□ -1.77
PUF3Q07807 TIF35YDR429C 825 nt3.99□□□□□ -1.77
PUF3Q07807 RPS18AYDR450W 441 nt3.99□□□□□ -1.77
PUF3Q07807 RRT13YER066W 558 nt3.99□□□□□ -1.77
PUF3Q07807 YGR242WYGR242W 309 nt3.99□□□□□ -1.77
PUF3Q07807 YHR212CYHR212C 336 nt3.99□□□□□ -1.77
PUF3Q07807 YIR040CYIR040C 333 nt3.99□□□□□ -1.77
PUF3Q07807 RPA12YJR063W 378 nt3.99□□□□□ -1.77
PUF3Q07807 YAR060CYAR060C 336 nt3.99□□□□□ -1.77
PUF3Q07807 SIL1YOL031C 1266 nt3.99□□□□□ -1.77
PUF3Q07807 YPL039WYPL039W 951 nt3.99□□□□□ -1.77
PUF3Q07807 ULP1YPL020C 1866 nt3.98□□□□□ -1.77
PUF3Q07807 HCS1YKL017C 2052 nt3.98□□□□□ -1.77
PUF3Q07807 NAT1YDL040C 2565 nt3.98□□□□□ -1.77
PUF3Q07807 TRX3YCR083W 384 nt3.98□□□□□ -1.77
PUF3Q07807 YDL185C-AYDL185C-A 228 nt3.98□□□□□ -1.77
PUF3Q07807 YDR524C-AYDR524C-A 120 nt3.98□□□□□ -1.77
PUF3Q07807 IRC4YDR540C 540 nt3.98□□□□□ -1.77
PUF3Q07807 IGO2YHR132W-A 396 nt3.98□□□□□ -1.77
PUF3Q07807 YLR154W-BYLR154W-B 165 nt3.98□□□□□ -1.77
PUF3Q07807 YAR070CYAR070C 300 nt3.98□□□□□ -1.77
PUF3Q07807 TMA10YLR327C 261 nt3.98□□□□□ -1.77
PUF3Q07807 YLR342W-AYLR342W-A 174 nt3.98□□□□□ -1.77
PUF3Q07807 PRE8YML092C 753 nt3.98□□□□□ -1.77
PUF3Q07807 KRE5YOR336W 4098 nt3.98□□□□□ -1.77
PUF3Q07807 CBP2YHL038C 1893 nt3.98□□□□□ -1.77
PUF3Q07807 YDR338CYDR338C 2088 nt3.98□□□□□ -1.77
PUF3Q07807 NOG1YPL093W 1944 nt3.97□□□□□ -1.77
PUF3Q07807 SEG1YMR086W 2883 nt3.97□□□□□ -1.77
PUF3Q07807 YFH1YDL120W 525 nt3.97□□□□□ -1.77
PUF3Q07807 YER066C-AYER066C-A 501 nt3.97□□□□□ -1.77
PUF3Q07807 HEM4YOR278W 828 nt3.97□□□□□ -1.77
PUF3Q07807 APC5YOR249C 2058 nt3.97□□□□□ -1.77
PUF3Q07807 RPO21YDL140C 5202 nt3.97□□□□□ -1.77
PUF3Q07807 VPS52YDR484W 1926 nt3.97□□□□□ -1.77
PUF3Q07807 GAC1YOR178C 2382 nt3.97□□□□□ -1.77
PUF3Q07807 YJL016WYJL016W 1686 nt3.97□□□□□ -1.77
PUF3Q07807 PDR12YPL058C 4536 nt3.96□□□□□ -1.77
PUF3Q07807 ROD1YOR018W 2514 nt3.96□□□□□ -1.77
PUF3Q07807 FUS1YCL027W 1539 nt3.96□□□□□ -1.78
PUF3Q07807 YRM1YOR172W 2361 nt3.96□□□□□ -1.78 RIP-Chip
PUF3Q07807 CEP3YMR168C 1827 nt3.96□□□□□ -1.78
PUF3Q07807 YEL020C-BYEL020C-B 198 nt3.96□□□□□ -1.78
PUF3Q07807 FMP10YER182W 735 nt3.96□□□□□ -1.78
PUF3Q07807 YGR051CYGR051C 324 nt3.96□□□□□ -1.78
PUF3Q07807 HSP10YOR020C 321 nt3.96□□□□□ -1.78
PUF3Q07807 STN1YDR082W 1485 nt3.96□□□□□ -1.78
PUF3Q07807 TCB3YML072C 4638 nt3.96□□□□□ -1.78
PUF3Q07807 PEX6YNL329C 3093 nt3.96□□□□□ -1.78 RIP-Chip
PUF3Q07807 RPO31YOR116C 4383 nt3.95□□□□□ -1.78
PUF3Q07807 YKU70YMR284W 1809 nt3.95□□□□□ -1.78
PUF3Q07807 YDR442WYDR442W 393 nt3.95□□□□□ -1.78
PUF3Q07807 OST6YML019W 999 nt3.95□□□□□ -1.78
PUF3Q07807 TAF6YGL112C 1551 nt3.94□□□□□ -1.78
PUF3Q07807 DAP2YHR028C 2457 nt3.94□□□□□ -1.78
PUF3Q07807 BNA4YBL098W 1383 nt3.94□□□□□ -1.78
PUF3Q07807 ALG13YGL047W 609 nt3.94□□□□□ -1.78
PUF3Q07807 NOP19YGR251W 591 nt3.94□□□□□ -1.78
PUF3Q07807 PSY1YKL076C 384 nt3.94□□□□□ -1.78
PUF3Q07807 YAL059C-AYAL059C-A 423 nt3.94□□□□□ -1.78
PUF3Q07807 YMR194C-AYMR194C-A 225 nt3.94□□□□□ -1.78
PUF3Q07807 SLM6YBR266C 453 nt3.94□□□□□ -1.78
PUF3Q07807 YSW1YBR148W 1830 nt3.93□□□□□ -1.78
PUF3Q07807 YJR030CYJR030C 2238 nt3.93□□□□□ -1.78
PUF3Q07807 SCW11YGL028C 1629 nt3.93□□□□□ -1.78
PUF3Q07807 YLL032CYLL032C 2478 nt3.93□□□□□ -1.78
PUF3Q07807 YGR174W-AYGR174W-A 87 nt3.93□□□□□ -1.78
PUF3Q07807 PAU14YIL176C 363 nt3.93□□□□□ -1.78
PUF3Q07807 PAU1YJL223C 363 nt3.93□□□□□ -1.78
PUF3Q07807 TAR1YLR154W-C 375 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms