Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 PRP38YGR075C 729 nt2.71□□□□□ -1.98
RPA49Q01080 YBR085C-AYBR085C-A 258 nt2.71□□□□□ -1.98
RPA49Q01080 VID24YBR105C 1089 nt2.71□□□□□ -1.98
RPA49Q01080 YDR098C-BYDR098C-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YDR210C-DYDR210C-D 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YDR316W-BYDR316W-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YDR365W-BYDR365W-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YER138CYER138C 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YER160CYER160C 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YGR038C-BYGR038C-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YGR161C-DYGR161C-D 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YJR027WYJR027W 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YLR157C-BYLR157C-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YML039WYML039W 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YML045WYML045W 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YMR050CYMR050C 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YOL103W-BYOL103W-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YBR012W-BYBR012W-B 5271 nt2.71□□□□□ -1.98
RPA49Q01080 YOR142W-BYOR142W-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YPL257W-BYPL257W-B 5268 nt2.71□□□□□ -1.98
RPA49Q01080 YPR158W-BYPR158W-B 5271 nt2.71□□□□□ -1.98
RPA49Q01080 CWC22YGR278W 1734 nt2.71□□□□□ -1.98
RPA49Q01080 GCV2YMR189W 3105 nt2.71□□□□□ -1.98
RPA49Q01080 RLF2YPR018W 1821 nt2.7□□□□□ -1.98
RPA49Q01080 TRZ1YKR079C 2517 nt2.7□□□□□ -1.98
RPA49Q01080 YDR018CYDR018C 1191 nt2.7□□□□□ -1.98
RPA49Q01080 ERV1YGR029W 570 nt2.7□□□□□ -1.98
RPA49Q01080 VMA21YGR105W 234 nt2.7□□□□□ -1.98
RPA49Q01080 RPL27AYHR010W 411 nt2.7□□□□□ -1.98
RPA49Q01080 SDL1YIL167W 633 nt2.7□□□□□ -1.98
RPA49Q01080 EMC6YLL014W 327 nt2.7□□□□□ -1.98
RPA49Q01080 YLR224WYLR224W 1110 nt2.7□□□□□ -1.98
RPA49Q01080 PDP3YLR455W 915 nt2.7□□□□□ -1.98
RPA49Q01080 ATP18YML081C-A 180 nt2.7□□□□□ -1.98
RPA49Q01080 HSP10YOR020C 321 nt2.7□□□□□ -1.98
RPA49Q01080 MUD1YBR119W 897 nt2.7□□□□□ -1.98
RPA49Q01080 NEL1YHR035W 1893 nt2.7□□□□□ -1.98
RPA49Q01080 PSK2YOL045W 3306 nt2.7□□□□□ -1.98
RPA49Q01080 snR59snR59 78 nt2.69□□□□□ -1.98
RPA49Q01080 ACF4YJR083C 930 nt2.69□□□□□ -1.98
RPA49Q01080 YKL023C-AYKL023C-A 228 nt2.69□□□□□ -1.98
RPA49Q01080 ERG29YMR134W 714 nt2.69□□□□□ -1.98
RPA49Q01080 YOR050CYOR050C 348 nt2.69□□□□□ -1.98
RPA49Q01080 OST2YOR103C 393 nt2.69□□□□□ -1.98
RPA49Q01080 YOR169CYOR169C 465 nt2.69□□□□□ -1.98
RPA49Q01080 SHE4YOR035C 2370 nt2.69□□□□□ -1.98
RPA49Q01080 STD1YOR047C 1335 nt2.68□□□□□ -1.98
RPA49Q01080 ESC1YMR219W 4977 nt2.68□□□□□ -1.98
RPA49Q01080 YER189WYER189W 369 nt2.68□□□□□ -1.98
RPA49Q01080 LRP1YHR081W 555 nt2.68□□□□□ -1.98
RPA49Q01080 YJR087WYJR087W 351 nt2.68□□□□□ -1.98
RPA49Q01080 YNR034W-AYNR034W-A 297 nt2.68□□□□□ -1.98
RPA49Q01080 ESF2YNR054C 951 nt2.68□□□□□ -1.98
RPA49Q01080 YOL134CYOL134C 390 nt2.68□□□□□ -1.98
RPA49Q01080 YDR179W-AYDR179W-A 1392 nt2.68□□□□□ -1.98
RPA49Q01080 BNA4YBL098W 1383 nt2.68□□□□□ -1.98
RPA49Q01080 SRO77YBL106C 3033 nt2.68□□□□□ -1.98
RPA49Q01080 FIR1YER032W 2631 nt2.68□□□□□ -1.98
RPA49Q01080 FIN1YDR130C 876 nt2.67□□□□□ -1.98
RPA49Q01080 NCB2YDR397C 441 nt2.67□□□□□ -1.98
RPA49Q01080 YDR537CYDR537C 606 nt2.67□□□□□ -1.98
RPA49Q01080 SLX9YGR081C 633 nt2.67□□□□□ -1.98
RPA49Q01080 YGR228WYGR228W 345 nt2.67□□□□□ -1.98
RPA49Q01080 YGR242WYGR242W 309 nt2.67□□□□□ -1.98
RPA49Q01080 CKA1YIL035C 1119 nt2.67□□□□□ -1.98
RPA49Q01080 PEP12YOR036W 867 nt2.67□□□□□ -1.98
RPA49Q01080 SSN2YDR443C 4263 nt2.67□□□□□ -1.98
RPA49Q01080 OCA6YDR067C 675 nt2.66□□□□□ -1.98
RPA49Q01080 VPS74YDR372C 1038 nt2.66□□□□□ -1.98
RPA49Q01080 YJL119CYJL119C 324 nt2.66□□□□□ -1.98
RPA49Q01080 YPR203WYPR203W 309 nt2.66□□□□□ -1.98
RPA49Q01080 DAL5YJR152W 1632 nt2.66□□□□□ -1.98
RPA49Q01080 NUM1YDR150W 8247 nt2.66□□□□□ -1.98
RPA49Q01080 GAL80YML051W 1308 nt2.66□□□□□ -1.98
RPA49Q01080 BAS1YKR099W 2436 nt2.66□□□□□ -1.98
RPA49Q01080 DNL4YOR005C 2835 nt2.65□□□□□ -1.98
RPA49Q01080 JSN1YJR091C 3276 nt2.65□□□□□ -1.99
RPA49Q01080 RTS3YGR161C 792 nt2.65□□□□□ -1.99
RPA49Q01080 GMC2YLR445W 567 nt2.65□□□□□ -1.99
RPA49Q01080 YMR144WYMR144W 1029 nt2.65□□□□□ -1.99
RPA49Q01080 YMR187CYMR187C 1296 nt2.65□□□□□ -1.99
RPA49Q01080 YOL150CYOL150C 312 nt2.65□□□□□ -1.99
RPA49Q01080 RPL36BYPL249C-A 303 nt2.65□□□□□ -1.99
RPA49Q01080 PUF4YGL014W 2667 nt2.64□□□□□ -1.99
RPA49Q01080 snR76snR76 109 nt2.64□□□□□ -1.99
RPA49Q01080 VPS41YDR080W 2979 nt2.64□□□□□ -1.99
RPA49Q01080 NOP19YGR251W 591 nt2.64□□□□□ -1.99
RPA49Q01080 CSE4YKL049C 690 nt2.64□□□□□ -1.99
RPA49Q01080 TAP42YMR028W 1101 nt2.64□□□□□ -1.99
RPA49Q01080 GCD10YNL062C 1437 nt2.64□□□□□ -1.99
RPA49Q01080 YAL026C-AYAL026C-A 438 nt2.63□□□□□ -1.99
RPA49Q01080 YOR055WYOR055W 435 nt2.63□□□□□ -1.99
RPA49Q01080 ISU1YPL135W 498 nt2.63□□□□□ -1.99
RPA49Q01080 ALG14YBR070C 714 nt2.63□□□□□ -1.99
RPA49Q01080 NAB6YML117W 3405 nt2.63□□□□□ -1.99
RPA49Q01080 ARP8YOR141C 2646 nt2.63□□□□□ -1.99
RPA49Q01080 UTP14YML093W 2700 nt2.62□□□□□ -1.99
RPA49Q01080 YDR186CYDR186C 2634 nt2.62□□□□□ -1.99
RPA49Q01080 RRI2YOL117W 1938 nt2.62□□□□□ -1.99
RPA49Q01080 YBT1YLL048C 4986 nt2.62□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms