Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 AC137761.2-201ENST00000561729 223 ntBASIC19.93■□□□□ 0.78
KRT78Q8N1N4 AC145350.3-201ENST00000569033 163 ntBASIC19.93■□□□□ 0.78
KRT78Q8N1N4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.93■□□□□ 0.78
KRT78Q8N1N4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
KRT78Q8N1N4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 AC243732.1-201ENST00000612648 864 ntBASIC19.92■□□□□ 0.78
KRT78Q8N1N4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 MYCNOS-205ENST00000641950 531 ntBASIC19.92■□□□□ 0.78
KRT78Q8N1N4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT78Q8N1N4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT78Q8N1N4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 AC016769.1-201ENST00000409132 1010 ntBASIC19.9■□□□□ 0.78
KRT78Q8N1N4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 AL162430.1-201ENST00000480705 870 ntBASIC19.9■□□□□ 0.78
KRT78Q8N1N4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT78Q8N1N4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 AC011484.1-201ENST00000377652 1995 ntBASIC19.89■□□□□ 0.77
KRT78Q8N1N4 MIR935-201ENST00000401179 91 ntBASIC19.89■□□□□ 0.77
KRT78Q8N1N4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 RBM17P2-201ENST00000616397 1405 ntBASIC19.89■□□□□ 0.77
KRT78Q8N1N4 AC006128.1-201ENST00000624704 1661 ntBASIC19.89■□□□□ 0.77
KRT78Q8N1N4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT78Q8N1N4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
KRT78Q8N1N4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 828.8 ms