Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YAL037WYAL037W 804 nt2.06□□□□□ -2.08
RRP40Q08285 YAL059C-AYAL059C-A 423 nt2.06□□□□□ -2.08
RRP40Q08285 MBA1YBR185C 837 nt2.06□□□□□ -2.08
RRP40Q08285 SWA2YDR320C 2007 nt2.06□□□□□ -2.08
RRP40Q08285 YEL1YBL060W 2064 nt2.06□□□□□ -2.08
RRP40Q08285 ARP5YNL059C 2268 nt2.06□□□□□ -2.08
RRP40Q08285 STH1YIL126W 4080 nt2.06□□□□□ -2.08
RRP40Q08285 MTG1YMR097C 1104 nt2.05□□□□□ -2.08
RRP40Q08285 ATG19YOL082W 1248 nt2.05□□□□□ -2.08
RRP40Q08285 YOL107WYOL107W 1029 nt2.05□□□□□ -2.08
RRP40Q08285 YBR090CYBR090C 369 nt2.05□□□□□ -2.08
RRP40Q08285 BRE5YNR051C 1548 nt2.05□□□□□ -2.08
RRP40Q08285 KSP1YHR082C 3090 nt2.05□□□□□ -2.08
RRP40Q08285 SEM1YDR363W-A 270 nt2.04□□□□□ -2.08
RRP40Q08285 RGA2YDR379W 3030 nt2.04□□□□□ -2.08
RRP40Q08285 YJL052C-AYJL052C-A 120 nt2.04□□□□□ -2.08
RRP40Q08285 NYV1YLR093C 762 nt2.04□□□□□ -2.08
RRP40Q08285 ALK2YBL009W 2031 nt2.04□□□□□ -2.08
RRP40Q08285 TAE2YPL009C 3117 nt2.04□□□□□ -2.08
RRP40Q08285 INP53YOR109W 3324 nt2.03□□□□□ -2.08
RRP40Q08285 YCT1YLL055W 1596 nt2.03□□□□□ -2.08
RRP40Q08285 PUF4YGL014W 2667 nt2.03□□□□□ -2.08
RRP40Q08285 RUB1YDR139C 234 nt2.03□□□□□ -2.08
RRP40Q08285 YER107W-AYER107W-A 321 nt2.03□□□□□ -2.08
RRP40Q08285 MPC1YGL080W 393 nt2.03□□□□□ -2.08
RRP40Q08285 YGR053CYGR053C 852 nt2.03□□□□□ -2.08
RRP40Q08285 IRC21YMR073C 606 nt2.03□□□□□ -2.08
RRP40Q08285 YMR158C-AYMR158C-A 138 nt2.03□□□□□ -2.08
RRP40Q08285 RPL36AYMR194W 303 nt2.03□□□□□ -2.08
RRP40Q08285 YNL046WYNL046W 519 nt2.03□□□□□ -2.08
RRP40Q08285 YOR366WYOR366W 354 nt2.03□□□□□ -2.08
RRP40Q08285 PEX34YCL056C 435 nt2.03□□□□□ -2.08
RRP40Q08285 SCY1YGL083W 2415 nt2.03□□□□□ -2.08
RRP40Q08285 SAP185YJL098W 3177 nt2.03□□□□□ -2.08
RRP40Q08285 EDS1YBR033W 2760 nt2.02□□□□□ -2.09
RRP40Q08285 snR76snR76 109 nt2.02□□□□□ -2.09
RRP40Q08285 SLD5YDR489W 885 nt2.02□□□□□ -2.09
RRP40Q08285 YER091C-AYER091C-A 222 nt2.02□□□□□ -2.09
RRP40Q08285 PEA2YER149C 1263 nt2.02□□□□□ -2.09
RRP40Q08285 MPO1YGL010W 525 nt2.02□□□□□ -2.09
RRP40Q08285 YJL202CYJL202C 348 nt2.02□□□□□ -2.09
RRP40Q08285 MRP49YKL167C 414 nt2.02□□□□□ -2.09
RRP40Q08285 ATX1YNL259C 222 nt2.02□□□□□ -2.09
RRP40Q08285 YNR034W-AYNR034W-A 297 nt2.02□□□□□ -2.09
RRP40Q08285 ESF2YNR054C 951 nt2.02□□□□□ -2.09
RRP40Q08285 CSI2YOL007C 1026 nt2.02□□□□□ -2.09
RRP40Q08285 CUP9YPL177C 921 nt2.02□□□□□ -2.09
RRP40Q08285 URK1YNR012W 1506 nt2.01□□□□□ -2.09
RRP40Q08285 YPR097WYPR097W 3222 nt2.01□□□□□ -2.09
RRP40Q08285 YNL018CYNL018C 1839 nt2.01□□□□□ -2.09
RRP40Q08285 SRB7YDR308C 423 nt2.01□□□□□ -2.09
RRP40Q08285 GPI19YDR437W 423 nt2.01□□□□□ -2.09
RRP40Q08285 RPL11BYGR085C 525 nt2.01□□□□□ -2.09
RRP40Q08285 RRF1YHR038W 693 nt2.01□□□□□ -2.09
RRP40Q08285 HYM1YKL189W 1200 nt2.01□□□□□ -2.09
RRP40Q08285 RGM1YMR182C 636 nt2.01□□□□□ -2.09
RRP40Q08285 RPL11AYPR102C 525 nt2.01□□□□□ -2.09
RRP40Q08285 snR24snR24 89 nt2.01□□□□□ -2.09
RRP40Q08285 FUS1YCL027W 1539 nt2.01□□□□□ -2.09
RRP40Q08285 RLF2YPR018W 1821 nt2.01□□□□□ -2.09
RRP40Q08285 YHR214C-BYHR214C-B 5382 nt2□□□□□ -2.09
RRP40Q08285 SNA4YDL123W 423 nt2□□□□□ -2.09
RRP40Q08285 YER138W-AYER138W-A 105 nt2□□□□□ -2.09
RRP40Q08285 RPL22BYFL034C-A 369 nt2□□□□□ -2.09
RRP40Q08285 BRP1YGL007W 378 nt2□□□□□ -2.09
RRP40Q08285 VPH2YKL119C 648 nt2□□□□□ -2.09
RRP40Q08285 ATG10YLL042C 504 nt2□□□□□ -2.09
RRP40Q08285 RPS22BYLR367W 393 nt2□□□□□ -2.09
RRP40Q08285 YBL107W-AYBL107W-A 105 nt2□□□□□ -2.09
RRP40Q08285 GRE2YOL151W 1029 nt2□□□□□ -2.09
RRP40Q08285 YOL162WYOL162W 648 nt2□□□□□ -2.09
RRP40Q08285 CRS5YOR031W 210 nt2□□□□□ -2.09
RRP40Q08285 UBS1YBR165W 834 nt2□□□□□ -2.09
RRP40Q08285 HRD3YLR207W 2502 nt2□□□□□ -2.09
RRP40Q08285 INP51YIL002C 2841 nt2□□□□□ -2.09
RRP40Q08285 FUS2YMR232W 2034 nt2□□□□□ -2.09
RRP40Q08285 NOP14YDL148C 2433 nt1.99□□□□□ -2.09
RRP40Q08285 CUP1-1YHR053C 186 nt1.99□□□□□ -2.09
RRP40Q08285 CUP1-2YHR055C 186 nt1.99□□□□□ -2.09
RRP40Q08285 ICY1YMR195W 384 nt1.99□□□□□ -2.09
RRP40Q08285 YAP7YOL028C 738 nt1.99□□□□□ -2.09
RRP40Q08285 RBL2YOR265W 321 nt1.99□□□□□ -2.09
RRP40Q08285 SEC66YBR171W 621 nt1.99□□□□□ -2.09
RRP40Q08285 UBP16YPL072W 1500 nt1.99□□□□□ -2.09
RRP40Q08285 ROY1YMR258C 1662 nt1.99□□□□□ -2.09
RRP40Q08285 HOS4YIL112W 3252 nt1.99□□□□□ -2.09
RRP40Q08285 YDR179W-AYDR179W-A 1392 nt1.98□□□□□ -2.09
RRP40Q08285 ESC2YDR363W 1371 nt1.98□□□□□ -2.09
RRP40Q08285 COG3YER157W 2406 nt1.98□□□□□ -2.09
RRP40Q08285 SPP41YDR464W 4308 nt1.98□□□□□ -2.09
RRP40Q08285 BRE1YDL074C 2103 nt1.98□□□□□ -2.09
RRP40Q08285 YDR381C-AYDR381C-A 345 nt1.98□□□□□ -2.09
RRP40Q08285 KOG1YHR186C 4674 nt1.98□□□□□ -2.09
RRP40Q08285 CKA1YIL035C 1119 nt1.98□□□□□ -2.09
RRP40Q08285 RPL16BYNL069C 597 nt1.98□□□□□ -2.09
RRP40Q08285 PET20YPL159C 762 nt1.98□□□□□ -2.09
RRP40Q08285 SLK19YOR195W 2466 nt1.98□□□□□ -2.09
RRP40Q08285 RGL1YPL066W 1440 nt1.98□□□□□ -2.09
RRP40Q08285 FAB1YFR019W 6837 nt1.98□□□□□ -2.09
RRP40Q08285 SPT14YPL175W 1359 nt1.98□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 47.3 ms