Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 YLR428CYLR428C 345 nt3.72□□□□□ -1.81
SPT20P50875 RPL16BYNL069C 597 nt3.72□□□□□ -1.81
SPT20P50875 snR13snR13 124 nt3.72□□□□□ -1.81
SPT20P50875 FSH3YOR280C 801 nt3.72□□□□□ -1.81
SPT20P50875 MUB1YMR100W 1863 nt3.72□□□□□ -1.81
SPT20P50875 CWH43YCR017C 2862 nt3.72□□□□□ -1.81
SPT20P50875 SIN4YNL236W 2925 nt3.71□□□□□ -1.81
SPT20P50875 CHL1YPL008W 2586 nt3.71□□□□□ -1.81
SPT20P50875 CDC36YDL165W 576 nt3.71□□□□□ -1.82
SPT20P50875 CAJ1YER048C 1176 nt3.71□□□□□ -1.82
SPT20P50875 YML116W-AYML116W-A 303 nt3.71□□□□□ -1.82
SPT20P50875 HUB1YNR032C-A 222 nt3.71□□□□□ -1.82
SPT20P50875 IDH2YOR136W 1110 nt3.71□□□□□ -1.82
SPT20P50875 BUD5YCR038C 1929 nt3.71□□□□□ -1.82
SPT20P50875 SRP72YPL210C 1923 nt3.71□□□□□ -1.82
SPT20P50875 ABP140YOR239W 1887 nt3.71□□□□□ -1.82
SPT20P50875 RPB2YOR151C 3675 nt3.71□□□□□ -1.82
SPT20P50875 YOL075CYOL075C 3885 nt3.7□□□□□ -1.82
SPT20P50875 HOP1YIL072W 1818 nt3.7□□□□□ -1.82
SPT20P50875 YNR065CYNR065C 3351 nt3.7□□□□□ -1.82
SPT20P50875 ISD11YER048W-A 285 nt3.7□□□□□ -1.82
SPT20P50875 YHR032C-AYHR032C-A 120 nt3.7□□□□□ -1.82
SPT20P50875 DGK1YOR311C 873 nt3.7□□□□□ -1.82
SPT20P50875 ALO1YML086C 1581 nt3.7□□□□□ -1.82
SPT20P50875 NOT5YPR072W 1683 nt3.7□□□□□ -1.82
SPT20P50875 ULP1YPL020C 1866 nt3.7□□□□□ -1.82
SPT20P50875 YBR238CYBR238C 2196 nt3.7□□□□□ -1.82
SPT20P50875 YCK2YNL154C 1641 nt3.7□□□□□ -1.82
SPT20P50875 MLH2YLR035C 2088 nt3.69□□□□□ -1.82
SPT20P50875 YLR177WYLR177W 1887 nt3.69□□□□□ -1.82
SPT20P50875 ROK1YGL171W 1695 nt3.69□□□□□ -1.82
SPT20P50875 YRB1YDR002W 606 nt3.69□□□□□ -1.82
SPT20P50875 YFR054CYFR054C 579 nt3.69□□□□□ -1.82
SPT20P50875 YGL152CYGL152C 678 nt3.69□□□□□ -1.82
SPT20P50875 YGR242WYGR242W 309 nt3.69□□□□□ -1.82
SPT20P50875 YHR139C-AYHR139C-A 312 nt3.69□□□□□ -1.82
SPT20P50875 MSL1YIR009W 336 nt3.69□□□□□ -1.82
SPT20P50875 SIP18YMR175W 240 nt3.69□□□□□ -1.82
SPT20P50875 IRC10YOL015W 1761 nt3.68□□□□□ -1.82
SPT20P50875 RSC3YDR303C 2658 nt3.68□□□□□ -1.82
SPT20P50875 SRC1YML034W 2505 nt3.68□□□□□ -1.82
SPT20P50875 RPS13YDR064W 456 nt3.68□□□□□ -1.82
SPT20P50875 YHR214W-AYHR214W-A 486 nt3.68□□□□□ -1.82
SPT20P50875 HYR1YIR037W 492 nt3.68□□□□□ -1.82
SPT20P50875 YAR068WYAR068W 486 nt3.68□□□□□ -1.82
SPT20P50875 YLR466C-BYLR466C-B 117 nt3.68□□□□□ -1.82
SPT20P50875 SSN8YNL025C 972 nt3.68□□□□□ -1.82
SPT20P50875 RPL9BYNL067W 576 nt3.68□□□□□ -1.82
SPT20P50875 PGA1YNL158W 597 nt3.68□□□□□ -1.82
SPT20P50875 YPR136CYPR136C 513 nt3.68□□□□□ -1.82
SPT20P50875 UBP12YJL197W 3765 nt3.68□□□□□ -1.82
SPT20P50875 YBP1YBR216C 2025 nt3.68□□□□□ -1.82
SPT20P50875 ACE2YLR131C 2313 nt3.67□□□□□ -1.82
SPT20P50875 YPS6YIR039C 1614 nt3.67□□□□□ -1.82
SPT20P50875 YBL028CYBL028C 321 nt3.67□□□□□ -1.82
SPT20P50875 IST1YNL265C 897 nt3.67□□□□□ -1.82
SPT20P50875 YCL023CYCL023C 348 nt3.67□□□□□ -1.82
SPT20P50875 snR51snR51 107 nt3.67□□□□□ -1.82
SPT20P50875 KIN4YOR233W 2403 nt3.67□□□□□ -1.82
SPT20P50875 ATG21YPL100W 1491 nt3.67□□□□□ -1.82
SPT20P50875 BAR1YIL015W 1764 nt3.66□□□□□ -1.82
SPT20P50875 SWI1YPL016W 3945 nt3.66□□□□□ -1.82
SPT20P50875 NCR1YPL006W 3513 nt3.66□□□□□ -1.82
SPT20P50875 YDL007C-AYDL007C-A 258 nt3.66□□□□□ -1.82
SPT20P50875 YDR442WYDR442W 393 nt3.66□□□□□ -1.82
SPT20P50875 RPB9YGL070C 369 nt3.66□□□□□ -1.82
SPT20P50875 YLR230WYLR230W 306 nt3.66□□□□□ -1.82
SPT20P50875 YOR170WYOR170W 306 nt3.66□□□□□ -1.82
SPT20P50875 SPC72YAL047C 1869 nt3.66□□□□□ -1.82
SPT20P50875 ASI1YMR119W 1875 nt3.66□□□□□ -1.82
SPT20P50875 TLC1TLC1 1301 nt3.66□□□□□ -1.82
SPT20P50875 ARO80YDR421W 2853 nt3.65□□□□□ -1.82
SPT20P50875 PET191YJR034W 327 nt3.65□□□□□ -1.83
SPT20P50875 YKL162C-AYKL162C-A 153 nt3.65□□□□□ -1.83
SPT20P50875 YMR307C-AYMR307C-A 195 nt3.65□□□□□ -1.83
SPT20P50875 YDR338CYDR338C 2088 nt3.65□□□□□ -1.83
SPT20P50875 ZDS1YMR273C 2748 nt3.65□□□□□ -1.83
SPT20P50875 YDL180WYDL180W 1644 nt3.64□□□□□ -1.83
SPT20P50875 NOP6YDL213C 678 nt3.64□□□□□ -1.83
SPT20P50875 YGR151CYGR151C 336 nt3.64□□□□□ -1.83
SPT20P50875 YIL012WYIL012W 342 nt3.64□□□□□ -1.83
SPT20P50875 APQ12YIL040W 417 nt3.64□□□□□ -1.83
SPT20P50875 YJR112W-AYJR112W-A 330 nt3.64□□□□□ -1.83
SPT20P50875 INN1YNL152W 1230 nt3.64□□□□□ -1.83
SPT20P50875 YNL179CYNL179C 438 nt3.64□□□□□ -1.83
SPT20P50875 YPL238CYPL238C 390 nt3.64□□□□□ -1.83
SPT20P50875 PAC1YOR269W 1485 nt3.64□□□□□ -1.83
SPT20P50875 MCD4YKL165C 2760 nt3.64□□□□□ -1.83
SPT20P50875 NDD1YOR372C 1665 nt3.64□□□□□ -1.83
SPT20P50875 TCB3YML072C 4638 nt3.63□□□□□ -1.83
SPT20P50875 AIM21YIR003W 2040 nt3.63□□□□□ -1.83
SPT20P50875 CEP3YMR168C 1827 nt3.63□□□□□ -1.83
SPT20P50875 SEG1YMR086W 2883 nt3.63□□□□□ -1.83
SPT20P50875 YBR225WYBR225W 2703 nt3.63□□□□□ -1.83
SPT20P50875 MCM7YBR202W 2538 nt3.63□□□□□ -1.83
SPT20P50875 YDR169C-AYDR169C-A 150 nt3.63□□□□□ -1.83
SPT20P50875 YDR230WYDR230W 348 nt3.63□□□□□ -1.83
SPT20P50875 HMF1YER057C 390 nt3.63□□□□□ -1.83
SPT20P50875 YER076W-AYER076W-A 348 nt3.63□□□□□ -1.83
SPT20P50875 SUP56tL(CAA)A 82 nt3.63□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms