Protein–RNA interactions for Protein: P47977

TIS11, mRNA decay factor CTH2, yeastyeast

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIS11P47977 YPL276WYPL276W 438 nt2.6□□□□□ -1.99
TIS11P47977 YPR012WYPR012W 255 nt2.6□□□□□ -1.99
TIS11P47977 LTP1YPR073C 486 nt2.6□□□□□ -1.99
TIS11P47977 RRG8YPR116W 834 nt2.6□□□□□ -1.99
TIS11P47977 SWD3YBR175W 948 nt2.6□□□□□ -1.99
TIS11P47977 YNL284C-AYNL284C-A 1323 nt2.6□□□□□ -1.99
TIS11P47977 SYO1YDL063C 1863 nt2.6□□□□□ -1.99
TIS11P47977 SEC7YDR170C 6030 nt2.6□□□□□ -1.99
TIS11P47977 RGL1YPL066W 1440 nt2.59□□□□□ -1.99
TIS11P47977 YKL100CYKL100C 1764 nt2.59□□□□□ -1.99
TIS11P47977 LST4YKL176C 2487 nt2.59□□□□□ -1.99
TIS11P47977 YDR118W-AYDR118W-A 117 nt2.59□□□□□ -1.99
TIS11P47977 YER084W-AYER084W-A 513 nt2.59□□□□□ -1.99
TIS11P47977 YFL015CYFL015C 495 nt2.59□□□□□ -1.99
TIS11P47977 FAR7YFR008W 666 nt2.59□□□□□ -1.99
TIS11P47977 UPF3YGR072W 1164 nt2.59□□□□□ -1.99
TIS11P47977 RPL16AYIL133C 600 nt2.59□□□□□ -1.99
TIS11P47977 AIM36YMR157C 768 nt2.59□□□□□ -1.99
TIS11P47977 PHO80YOL001W 882 nt2.59□□□□□ -1.99
TIS11P47977 SEC66YBR171W 621 nt2.59□□□□□ -1.99
TIS11P47977 PUF6YDR496C 1971 nt2.59□□□□□ -2
TIS11P47977 TMA64YDR117C 1698 nt2.59□□□□□ -2
TIS11P47977 MED1YPR070W 1701 nt2.59□□□□□ -2
TIS11P47977 DYN1YKR054C 12279 nt2.59□□□□□ -2
TIS11P47977 VPS64YDR200C 1815 nt2.58□□□□□ -2
TIS11P47977 YJL132WYJL132W 2253 nt2.58□□□□□ -2
TIS11P47977 SKP2YNL311C 2292 nt2.58□□□□□ -2
TIS11P47977 GDS1YOR355W 1569 nt2.58□□□□□ -2
TIS11P47977 NAB3YPL190C 2409 nt2.58□□□□□ -2
TIS11P47977 PSK1YAL017W 4071 nt2.58□□□□□ -2
TIS11P47977 RSN1YMR266W 2862 nt2.58□□□□□ -2
TIS11P47977 PHR1YOR386W 1698 nt2.58□□□□□ -2
TIS11P47977 MIX14YDR031W 366 nt2.58□□□□□ -2
TIS11P47977 VPS74YDR372C 1038 nt2.58□□□□□ -2
TIS11P47977 VMA8YEL051W 771 nt2.58□□□□□ -2
TIS11P47977 PRM8YGL053W 714 nt2.58□□□□□ -2
TIS11P47977 RPL14BYHL001W 417 nt2.58□□□□□ -2
TIS11P47977 YIR020C-BYIR020C-B 735 nt2.58□□□□□ -2
TIS11P47977 DAD2YKR083C 402 nt2.58□□□□□ -2
TIS11P47977 YLR154W-FYLR154W-F 141 nt2.58□□□□□ -2
TIS11P47977 YKE2YLR200W 345 nt2.58□□□□□ -2
TIS11P47977 BER1YLR412W 825 nt2.58□□□□□ -2
TIS11P47977 YBL065WYBL065W 345 nt2.58□□□□□ -2
TIS11P47977 YNL150WYNL150W 408 nt2.58□□□□□ -2
TIS11P47977 ATG3YNR007C 933 nt2.58□□□□□ -2
TIS11P47977 FYV12YOR183W 390 nt2.58□□□□□ -2
TIS11P47977 NSA1YGL111W 1392 nt2.58□□□□□ -2
TIS11P47977 FRE2YKL220C 2136 nt2.57□□□□□ -2
TIS11P47977 YHR078WYHR078W 1659 nt2.57□□□□□ -2
TIS11P47977 POL4YCR014C 1749 nt2.57□□□□□ -2
TIS11P47977 YER046W-AYER046W-A 330 nt2.57□□□□□ -2
TIS11P47977 PNC1YGL037C 651 nt2.57□□□□□ -2
TIS11P47977 YGR121W-AYGR121W-A 216 nt2.57□□□□□ -2
TIS11P47977 YHL046W-AYHL046W-A 327 nt2.57□□□□□ -2
TIS11P47977 MRPL38YKL170W 417 nt2.57□□□□□ -2
TIS11P47977 YNR034W-AYNR034W-A 297 nt2.57□□□□□ -2
TIS11P47977 GRE2YOL151W 1029 nt2.57□□□□□ -2
TIS11P47977 AFT2YPL202C 1251 nt2.57□□□□□ -2
TIS11P47977 MSH4YFL003C 2637 nt2.57□□□□□ -2
TIS11P47977 MET6YER091C 2304 nt2.57□□□□□ -2
TIS11P47977 ASM4YDL088C 1587 nt2.57□□□□□ -2
TIS11P47977 SPO71YDR104C 3738 nt2.56□□□□□ -2
TIS11P47977 ASG7YJL170C 630 nt2.56□□□□□ -2
TIS11P47977 VPS63YLR261C 327 nt2.56□□□□□ -2
TIS11P47977 YNL043CYNL043C 321 nt2.56□□□□□ -2
TIS11P47977 YNL046WYNL046W 519 nt2.56□□□□□ -2
TIS11P47977 INO4YOL108C 456 nt2.56□□□□□ -2
TIS11P47977 RPC40YPR110C 1008 nt2.56□□□□□ -2
TIS11P47977 SNU56YDR240C 1479 nt2.56□□□□□ -2
TIS11P47977 VAC8YEL013W 1737 nt2.56□□□□□ -2
TIS11P47977 MDM36YPR083W 1740 nt2.56□□□□□ -2
TIS11P47977 PEX5YDR244W 1839 nt2.56□□□□□ -2
TIS11P47977 TOM1YDR457W 9807 nt2.56□□□□□ -2
TIS11P47977 15S_rRNA15S_rRNA 1649 nt2.55□□□□□ -2
TIS11P47977 YDR114CYDR114C 303 nt2.55□□□□□ -2
TIS11P47977 YDR115WYDR115W 318 nt2.55□□□□□ -2
TIS11P47977 RPN3YER021W 1572 nt2.55□□□□□ -2
TIS11P47977 CHZ1YER030W 462 nt2.55□□□□□ -2
TIS11P47977 VHR2YER064C 1518 nt2.55□□□□□ -2
TIS11P47977 tW(CCA)G1tW(CCA)G1 72 nt2.55□□□□□ -2
TIS11P47977 VHR1YIL056W 1923 nt2.55□□□□□ -2
TIS11P47977 tW(CCA)G2tW(CCA)G2 72 nt2.55□□□□□ -2
TIS11P47977 tW(CCA)JtW(CCA)J 72 nt2.55□□□□□ -2
TIS11P47977 tW(CCA)KtW(CCA)K 72 nt2.55□□□□□ -2
TIS11P47977 tW(CCA)MtW(CCA)M 72 nt2.55□□□□□ -2
TIS11P47977 tW(CCA)PtW(CCA)P 72 nt2.55□□□□□ -2
TIS11P47977 YAL031W-AYAL031W-A 309 nt2.55□□□□□ -2
TIS11P47977 DBP7YKR024C 2229 nt2.55□□□□□ -2
TIS11P47977 BPT1YLL015W 4680 nt2.55□□□□□ -2
TIS11P47977 GAL80YML051W 1308 nt2.55□□□□□ -2
TIS11P47977 YMR052C-AYMR052C-A 366 nt2.55□□□□□ -2
TIS11P47977 PSY2YNL201C 2577 nt2.55□□□□□ -2
TIS11P47977 RPS12YOR369C 432 nt2.55□□□□□ -2
TIS11P47977 RPB5YBR154C 648 nt2.55□□□□□ -2
TIS11P47977 RIF1YBR275C 5751 nt2.55□□□□□ -2
TIS11P47977 DSE4YNR067C 3354 nt2.55□□□□□ -2
TIS11P47977 TCB2YNL087W 3537 nt2.54□□□□□ -2
TIS11P47977 VAC14YLR386W 2643 nt2.54□□□□□ -2
TIS11P47977 YDR262WYDR262W 819 nt2.54□□□□□ -2
TIS11P47977 YER175W-AYER175W-A 165 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms