Protein–RNA interactions for Protein: P46678

BDP1, Transcription factor TFIIIB component B'', yeastyeast

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDP1P46678 YDL247W-AYDL247W-A 75 nt5.08□□□□□ -1.6
BDP1P46678 YEL075CYEL075C 369 nt5.08□□□□□ -1.6
BDP1P46678 YER189WYER189W 369 nt5.08□□□□□ -1.6
BDP1P46678 VEL1YGL258W 621 nt5.08□□□□□ -1.6
BDP1P46678 YHR214W-AYHR214W-A 486 nt5.08□□□□□ -1.6
BDP1P46678 YAR068WYAR068W 486 nt5.08□□□□□ -1.6
BDP1P46678 SRL1YOR247W 633 nt5.08□□□□□ -1.6
BDP1P46678 DIB1YPR082C 432 nt5.08□□□□□ -1.6
BDP1P46678 YBR197CYBR197C 654 nt5.08□□□□□ -1.6
BDP1P46678 MDM30YLR368W 1797 nt5.08□□□□□ -1.6
BDP1P46678 TRM44YPL030W 1704 nt5.08□□□□□ -1.6
BDP1P46678 RPG1YBR079C 2895 nt5.07□□□□□ -1.6
BDP1P46678 YDL062WYDL062W 426 nt5.07□□□□□ -1.6
BDP1P46678 YAE1YJR067C 426 nt5.07□□□□□ -1.6
BDP1P46678 YPL260WYPL260W 1656 nt5.07□□□□□ -1.6
BDP1P46678 PHO87YCR037C 2772 nt5.07□□□□□ -1.6
BDP1P46678 NPR2YEL062W 1848 nt5.07□□□□□ -1.6
BDP1P46678 STI1YOR027W 1770 nt5.06□□□□□ -1.6
BDP1P46678 snR55snR55 98 nt5.06□□□□□ -1.6
BDP1P46678 HTL1YCR020W-B 237 nt5.06□□□□□ -1.6
BDP1P46678 YLR140WYLR140W 327 nt5.06□□□□□ -1.6
BDP1P46678 TAR1YLR154W-C 375 nt5.06□□□□□ -1.6
BDP1P46678 SIP18YMR175W 240 nt5.06□□□□□ -1.6
BDP1P46678 YPL238CYPL238C 390 nt5.06□□□□□ -1.6
BDP1P46678 YCR023CYCR023C 1836 nt5.05□□□□□ -1.6
BDP1P46678 tQ(UUG)CtQ(UUG)C 72 nt5.05□□□□□ -1.6
BDP1P46678 tQ(UUG)D1tQ(UUG)D1 72 nt5.05□□□□□ -1.6
BDP1P46678 tQ(UUG)D2tQ(UUG)D2 72 nt5.05□□□□□ -1.6
BDP1P46678 tQ(UUG)D3tQ(UUG)D3 72 nt5.05□□□□□ -1.6
BDP1P46678 tQ(UUG)E1tQ(UUG)E1 72 nt5.05□□□□□ -1.6
BDP1P46678 tQ(UUG)HtQ(UUG)H 72 nt5.05□□□□□ -1.6
BDP1P46678 tQ(UUG)LtQ(UUG)L 72 nt5.05□□□□□ -1.6
BDP1P46678 YHR139C-AYHR139C-A 312 nt5.05□□□□□ -1.6
BDP1P46678 YBL053WYBL053W 375 nt5.05□□□□□ -1.6
BDP1P46678 HDA2YDR295C 2025 nt5.04□□□□□ -1.6
BDP1P46678 RKM1YPL208W 1752 nt5.04□□□□□ -1.6
BDP1P46678 UTP25YIL091C 2166 nt5.04□□□□□ -1.6
BDP1P46678 RDN5-1RDN5-1 121 nt5.04□□□□□ -1.6
BDP1P46678 RDN5-6RDN5-6 121 nt5.04□□□□□ -1.6
BDP1P46678 PRE8YML092C 753 nt5.04□□□□□ -1.6
BDP1P46678 TVP18YMR071C 504 nt5.04□□□□□ -1.6
BDP1P46678 YOL019WYOL019W 1656 nt5.04□□□□□ -1.6
BDP1P46678 BCH2YKR027W 2298 nt5.04□□□□□ -1.6
BDP1P46678 PTR3YFR029W 2037 nt5.04□□□□□ -1.6
BDP1P46678 RIM13YMR154C 2184 nt5.04□□□□□ -1.6
BDP1P46678 YJL132WYJL132W 2253 nt5.03□□□□□ -1.6
BDP1P46678 CDC15YAR019C 2925 nt5.03□□□□□ -1.6
BDP1P46678 YFR010W-AYFR010W-A 189 nt5.03□□□□□ -1.6
BDP1P46678 RPL11BYGR085C 525 nt5.03□□□□□ -1.6
BDP1P46678 PXR1YGR280C 816 nt5.03□□□□□ -1.6
BDP1P46678 RAD27YKL113C 1149 nt5.03□□□□□ -1.6
BDP1P46678 YLR154W-EYLR154W-E 204 nt5.03□□□□□ -1.6
BDP1P46678 RPL11AYPR102C 525 nt5.03□□□□□ -1.6
BDP1P46678 TAF7YMR227C 1773 nt5.03□□□□□ -1.6
BDP1P46678 OPT2YPR194C 2634 nt5.03□□□□□ -1.6
BDP1P46678 SYO1YDL063C 1863 nt5.03□□□□□ -1.6
BDP1P46678 HOYDL227C 1761 nt5.02□□□□□ -1.61
BDP1P46678 ATP17YDR377W 306 nt5.02□□□□□ -1.61
BDP1P46678 YEL014CYEL014C 306 nt5.02□□□□□ -1.61
BDP1P46678 GPP2YER062C 753 nt5.02□□□□□ -1.61
BDP1P46678 PET191YJR034W 327 nt5.02□□□□□ -1.61
BDP1P46678 OM14YBR230C 405 nt5.02□□□□□ -1.61
BDP1P46678 FRT2YAL028W 1587 nt5.02□□□□□ -1.61
BDP1P46678 SHQ1YIL104C 1524 nt5.02□□□□□ -1.61
BDP1P46678 TPA1YER049W 1935 nt5.01□□□□□ -1.61
BDP1P46678 SPC72YAL047C 1869 nt5.01□□□□□ -1.61
BDP1P46678 snR68snR68 136 nt5.01□□□□□ -1.61
BDP1P46678 GPG1YGL121C 381 nt5.01□□□□□ -1.61
BDP1P46678 COX18YGR062C 951 nt5.01□□□□□ -1.61
BDP1P46678 RPL6BYLR448W 531 nt5.01□□□□□ -1.61
BDP1P46678 NAM2YLR382C 2685 nt5.01□□□□□ -1.61
BDP1P46678 ALR2YFL050C 2577 nt5.01□□□□□ -1.61
BDP1P46678 KIN2YLR096W 3444 nt5□□□□□ -1.61
BDP1P46678 PSY1YKL076C 384 nt5□□□□□ -1.61
BDP1P46678 OLE1YGL055W 1533 nt5□□□□□ -1.61
BDP1P46678 UTP15YMR093W 1542 nt5□□□□□ -1.61
BDP1P46678 COX1Q0045 1605 nt5□□□□□ -1.61
BDP1P46678 FAS2YPL231W 5664 nt5□□□□□ -1.61
BDP1P46678 PRS5YOL061W 1491 nt5□□□□□ -1.61
BDP1P46678 SYF1YDR416W 2580 nt5□□□□□ -1.61
BDP1P46678 URC2YDR520C 2319 nt5□□□□□ -1.61
BDP1P46678 BYE1YKL005C 1785 nt4.99□□□□□ -1.61
BDP1P46678 TMA17YDL110C 453 nt4.99□□□□□ -1.61
BDP1P46678 YER066C-AYER066C-A 501 nt4.99□□□□□ -1.61
BDP1P46678 ILV5YLR355C 1188 nt4.99□□□□□ -1.61
BDP1P46678 PMC1YGL006W 3522 nt4.99□□□□□ -1.61
BDP1P46678 ACK1YDL203C 1872 nt4.98□□□□□ -1.61
BDP1P46678 YIR040CYIR040C 333 nt4.98□□□□□ -1.61
BDP1P46678 YMR326CYMR326C 309 nt4.98□□□□□ -1.61
BDP1P46678 SUI1YNL244C 327 nt4.98□□□□□ -1.61
BDP1P46678 YOR329W-AYOR329W-A 210 nt4.98□□□□□ -1.61
BDP1P46678 YPL025CYPL025C 558 nt4.98□□□□□ -1.61
BDP1P46678 SKG6YHR149C 2205 nt4.98□□□□□ -1.61
BDP1P46678 UBP10YNL186W 2379 nt4.98□□□□□ -1.61
BDP1P46678 ORC2YBR060C 1863 nt4.97□□□□□ -1.61
BDP1P46678 YDR246W-AYDR246W-A 201 nt4.97□□□□□ -1.61
BDP1P46678 VTC1YER072W 390 nt4.97□□□□□ -1.61
BDP1P46678 IRC18YJL037W 675 nt4.97□□□□□ -1.61
BDP1P46678 NUT2YPR168W 474 nt4.97□□□□□ -1.61
BDP1P46678 YOL153CYOL153C 1746 nt4.97□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 32.1 ms