Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VPS25Q9BRG1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VPS25Q9BRG1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS25Q9BRG1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 AP002365.1-201ENST00000603448 772 ntBASIC14.5□□□□□ -0.09
VPS25Q9BRG1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
VPS25Q9BRG1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS25Q9BRG1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms