Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 RNA5SP413-201ENST00000516373 109 ntBASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 TMEM191A-211ENST00000637163 1067 ntBASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.11■□□□□ 0.81
SNAP47Q5SQN1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAP47Q5SQN1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 AC007375.3-201ENST00000600936 2314 ntBASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 AL512625.2-201ENST00000417533 625 ntBASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 AC073210.2-201ENST00000430369 194 ntBASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 AC243732.1-201ENST00000612648 864 ntBASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAP47Q5SQN1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 AC245052.3-201ENST00000450182 901 ntBASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.08■□□□□ 0.81
SNAP47Q5SQN1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNAP47Q5SQN1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.08■□□□□ 0.8
SNAP47Q5SQN1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNAP47Q5SQN1 AC233723.2-201ENST00000623798 2106 ntBASIC20.08■□□□□ 0.8
SNAP47Q5SQN1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 FAM201B-201ENST00000458407 597 ntBASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 RARRES2P4-201ENST00000514074 484 ntBASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAP47Q5SQN1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms