Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 MED1YPR070W 1701 nt1.59□□□□□ -2.16
TY1B-NL1Q12112 TAZ1YPR140W 1146 nt1.59□□□□□ -2.16
TY1B-NL1Q12112 GAS2YLR343W 1668 nt1.59□□□□□ -2.16
TY1B-NL1Q12112 ULP2YIL031W 3105 nt1.58□□□□□ -2.16
TY1B-NL1Q12112 RLF2YPR018W 1821 nt1.58□□□□□ -2.16
TY1B-NL1Q12112 RPL1BYGL135W 654 nt1.58□□□□□ -2.16
TY1B-NL1Q12112 RPL1AYPL220W 654 nt1.58□□□□□ -2.16
TY1B-NL1Q12112 GPI17YDR434W 1605 nt1.58□□□□□ -2.16
TY1B-NL1Q12112 WBP1YEL002C 1293 nt1.57□□□□□ -2.16
TY1B-NL1Q12112 YHR182C-AYHR182C-A 474 nt1.57□□□□□ -2.16
TY1B-NL1Q12112 YKR011CYKR011C 1062 nt1.57□□□□□ -2.16
TY1B-NL1Q12112 YPR078CYPR078C 1119 nt1.57□□□□□ -2.16
TY1B-NL1Q12112 YMR175W-AYMR175W-A 195 nt1.57□□□□□ -2.16
TY1B-NL1Q12112 SCC2YDR180W 4482 nt1.57□□□□□ -2.16
TY1B-NL1Q12112 SET4YJL105W 1683 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 VMR1YHL035C 4779 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 MAK5YBR142W 2322 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 PEX14YGL153W 1026 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 YIR043CYIR043C 693 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 YAL042C-AYAL042C-A 378 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 YLR366WYLR366W 306 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 PEX12YMR026C 1200 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 ATX2YOR079C 942 nt1.56□□□□□ -2.16
TY1B-NL1Q12112 YGR011WYGR011W 327 nt1.55□□□□□ -2.16
TY1B-NL1Q12112 PTC5YOR090C 1719 nt1.55□□□□□ -2.16
TY1B-NL1Q12112 FIR1YER032W 2631 nt1.55□□□□□ -2.16
TY1B-NL1Q12112 ATG9YDL149W 2994 nt1.55□□□□□ -2.16
TY1B-NL1Q12112 IRC6YFR043C 714 nt1.54□□□□□ -2.16
TY1B-NL1Q12112 VMA22YHR060W 546 nt1.54□□□□□ -2.16
TY1B-NL1Q12112 YOR072W-AYOR072W-A 249 nt1.54□□□□□ -2.16
TY1B-NL1Q12112 SPT7YBR081C 3999 nt1.54□□□□□ -2.16
TY1B-NL1Q12112 URC2YDR520C 2319 nt1.54□□□□□ -2.16
TY1B-NL1Q12112 IMG2YCR071C 441 nt1.54□□□□□ -2.16
TY1B-NL1Q12112 YLR416CYLR416C 399 nt1.54□□□□□ -2.16
TY1B-NL1Q12112 YPS5YGL259W 498 nt1.53□□□□□ -2.16
TY1B-NL1Q12112 PCL5YHR071W 690 nt1.53□□□□□ -2.16
TY1B-NL1Q12112 YET1YKL065C 621 nt1.53□□□□□ -2.16
TY1B-NL1Q12112 YMR321CYMR321C 318 nt1.53□□□□□ -2.16
TY1B-NL1Q12112 HHF1YBR009C 312 nt1.53□□□□□ -2.16
TY1B-NL1Q12112 YBR174CYBR174C 315 nt1.53□□□□□ -2.16
TY1B-NL1Q12112 ALG8YOR067C 1734 nt1.52□□□□□ -2.17
TY1B-NL1Q12112 RLP7YNL002C 969 nt1.52□□□□□ -2.17
TY1B-NL1Q12112 BIR1YJR089W 2865 nt1.52□□□□□ -2.17
TY1B-NL1Q12112 YCR081C-AYCR081C-A 237 nt1.52□□□□□ -2.17
TY1B-NL1Q12112 YDR336WYDR336W 945 nt1.52□□□□□ -2.17
TY1B-NL1Q12112 PMI40YER003C 1290 nt1.52□□□□□ -2.17
TY1B-NL1Q12112 SKI8YGL213C 1194 nt1.51□□□□□ -2.17
TY1B-NL1Q12112 YPT52YKR014C 705 nt1.51□□□□□ -2.17
TY1B-NL1Q12112 BUR2YLR226W 1188 nt1.51□□□□□ -2.17
TY1B-NL1Q12112 RGL1YPL066W 1440 nt1.5□□□□□ -2.17
TY1B-NL1Q12112 MRPL44YMR225C 297 nt1.5□□□□□ -2.17
TY1B-NL1Q12112 GRE2YOL151W 1029 nt1.5□□□□□ -2.17
TY1B-NL1Q12112 YBR134WYBR134W 402 nt1.5□□□□□ -2.17
TY1B-NL1Q12112 SPT14YPL175W 1359 nt1.5□□□□□ -2.17
TY1B-NL1Q12112 YIL086CYIL086C 309 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 RPA34YJL148W 702 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 YOL134CYOL134C 390 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 NEM1YHR004C 1341 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 UTP25YIL091C 2166 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 RAD18YCR066W 1464 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 PGD1YGL025C 1194 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 YJL119CYJL119C 324 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 YMR242W-AYMR242W-A 90 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 MGA1YGR249W 1371 nt1.49□□□□□ -2.17
TY1B-NL1Q12112 GCN2YDR283C 4980 nt1.48□□□□□ -2.17
TY1B-NL1Q12112 YIL080WYIL080W 4722 nt1.48□□□□□ -2.17
TY1B-NL1Q12112 PET127YOR017W 2403 nt1.48□□□□□ -2.17
TY1B-NL1Q12112 YMR160WYMR160W 2451 nt1.48□□□□□ -2.17
TY1B-NL1Q12112 ARG3YJL088W 1017 nt1.48□□□□□ -2.17
TY1B-NL1Q12112 VPS71YML041C 843 nt1.48□□□□□ -2.17
TY1B-NL1Q12112 COS12YGL263W 1143 nt1.47□□□□□ -2.17
TY1B-NL1Q12112 HTA2YBL003C 399 nt1.47□□□□□ -2.17
TY1B-NL1Q12112 AIM14YGL160W 1713 nt1.47□□□□□ -2.17
TY1B-NL1Q12112 PKH2YOL100W 3246 nt1.47□□□□□ -2.17
TY1B-NL1Q12112 SWI4YER111C 3282 nt1.47□□□□□ -2.17
TY1B-NL1Q12112 MNT3YIL014W 1893 nt1.47□□□□□ -2.17
TY1B-NL1Q12112 CDC39YCR093W 6327 nt1.46□□□□□ -2.18
TY1B-NL1Q12112 YNL011CYNL011C 1335 nt1.46□□□□□ -2.18
TY1B-NL1Q12112 YLR076CYLR076C 423 nt1.46□□□□□ -2.18
TY1B-NL1Q12112 EGD1YPL037C 474 nt1.46□□□□□ -2.18
TY1B-NL1Q12112 APA1YCL050C 966 nt1.46□□□□□ -2.18
TY1B-NL1Q12112 YBL005W-BYBL005W-B 5268 nt1.45□□□□□ -2.18
TY1B-NL1Q12112 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
TY1B-NL1Q12112 PSP1YDR505C 2526 nt1.45□□□□□ -2.18
TY1B-NL1Q12112 RPH1YER169W 2391 nt1.45□□□□□ -2.18
TY1B-NL1Q12112 IQG1YPL242C 4488 nt1.45□□□□□ -2.18
TY1B-NL1Q12112 PBY1YBR094W 2262 nt1.45□□□□□ -2.18
TY1B-NL1Q12112 AHC1YOR023C 1701 nt1.44□□□□□ -2.18
TY1B-NL1Q12112 OTU2YHL013C 924 nt1.44□□□□□ -2.18
TY1B-NL1Q12112 TMA7YLR262C-A 195 nt1.44□□□□□ -2.18
TY1B-NL1Q12112 KDX1YKL161C 1302 nt1.44□□□□□ -2.18
TY1B-NL1Q12112 PRM9YAR031W 897 nt1.44□□□□□ -2.18
TY1B-NL1Q12112 NAM7YMR080C 2916 nt1.43□□□□□ -2.18
TY1B-NL1Q12112 YGR039WYGR039W 312 nt1.43□□□□□ -2.18
TY1B-NL1Q12112 UIP3YAR027W 708 nt1.43□□□□□ -2.18
TY1B-NL1Q12112 MTL1YGR023W 1656 nt1.43□□□□□ -2.18
TY1B-NL1Q12112 GPM2YDL021W 936 nt1.42□□□□□ -2.18
TY1B-NL1Q12112 RPS29BYDL061C 171 nt1.42□□□□□ -2.18
TY1B-NL1Q12112 MRPL6YHR147C 645 nt1.42□□□□□ -2.18
TY1B-NL1Q12112 YCT1YLL055W 1596 nt1.42□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 68.9 ms